Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC23.24■■□□□ 1.31
Depdc1aQ8CIG0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Depdc1aQ8CIG0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Depdc1aQ8CIG0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Depdc1aQ8CIG0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
Depdc1aQ8CIG0 Serp2-204ENSMUST00000228055 705 ntBASIC23.22■■□□□ 1.31
Depdc1aQ8CIG0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Depdc1aQ8CIG0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Depdc1aQ8CIG0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Depdc1aQ8CIG0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Depdc1aQ8CIG0 Dmtn-209ENSMUST00000228295 2572 ntBASIC23.21■■□□□ 1.31
Depdc1aQ8CIG0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
Depdc1aQ8CIG0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Depdc1aQ8CIG0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Depdc1aQ8CIG0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Depdc1aQ8CIG0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Depdc1aQ8CIG0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Depdc1aQ8CIG0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Depdc1aQ8CIG0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Depdc1aQ8CIG0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC23.2■■□□□ 1.3
Depdc1aQ8CIG0 Gm6139-201ENSMUST00000079261 882 ntBASIC23.2■■□□□ 1.3
Depdc1aQ8CIG0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Depdc1aQ8CIG0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Depdc1aQ8CIG0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Depdc1aQ8CIG0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Depdc1aQ8CIG0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Depdc1aQ8CIG0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Depdc1aQ8CIG0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC23.19■■□□□ 1.3
Depdc1aQ8CIG0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Depdc1aQ8CIG0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC23.18■■□□□ 1.3
Depdc1aQ8CIG0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Depdc1aQ8CIG0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC23.18■■□□□ 1.3
Depdc1aQ8CIG0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
Depdc1aQ8CIG0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC23.18■■□□□ 1.3
Depdc1aQ8CIG0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Depdc1aQ8CIG0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC23.18■■□□□ 1.3
Depdc1aQ8CIG0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Depdc1aQ8CIG0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Depdc1aQ8CIG0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.17■■□□□ 1.3
Depdc1aQ8CIG0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC23.17■■□□□ 1.3
Depdc1aQ8CIG0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Depdc1aQ8CIG0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Depdc1aQ8CIG0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Depdc1aQ8CIG0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC23.16■■□□□ 1.3
Depdc1aQ8CIG0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Depdc1aQ8CIG0 Mir7075-201ENSMUST00000184187 82 ntBASIC23.16■■□□□ 1.3
Depdc1aQ8CIG0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Depdc1aQ8CIG0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Depdc1aQ8CIG0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Depdc1aQ8CIG0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Depdc1aQ8CIG0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Depdc1aQ8CIG0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC23.15■■□□□ 1.3
Depdc1aQ8CIG0 Gm5576-201ENSMUST00000075809 1236 ntBASIC23.15■■□□□ 1.3
Depdc1aQ8CIG0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Depdc1aQ8CIG0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Depdc1aQ8CIG0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Depdc1aQ8CIG0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Depdc1aQ8CIG0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC23.14■■□□□ 1.3
Depdc1aQ8CIG0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC23.14■■□□□ 1.29
Depdc1aQ8CIG0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC23.14■■□□□ 1.29
Depdc1aQ8CIG0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC23.14■■□□□ 1.29
Depdc1aQ8CIG0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Depdc1aQ8CIG0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Depdc1aQ8CIG0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Depdc1aQ8CIG0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Depdc1aQ8CIG0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Depdc1aQ8CIG0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Depdc1aQ8CIG0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC23.13■■□□□ 1.29
Depdc1aQ8CIG0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC23.13■■□□□ 1.29
Depdc1aQ8CIG0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Depdc1aQ8CIG0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Depdc1aQ8CIG0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Depdc1aQ8CIG0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Depdc1aQ8CIG0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Depdc1aQ8CIG0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Depdc1aQ8CIG0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Depdc1aQ8CIG0 Gm12251-201ENSMUST00000117893 792 ntBASIC23.12■■□□□ 1.29
Depdc1aQ8CIG0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Depdc1aQ8CIG0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
Depdc1aQ8CIG0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Depdc1aQ8CIG0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Depdc1aQ8CIG0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Depdc1aQ8CIG0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Depdc1aQ8CIG0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC23.11■■□□□ 1.29
Depdc1aQ8CIG0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Depdc1aQ8CIG0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC23.11■■□□□ 1.29
Depdc1aQ8CIG0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Depdc1aQ8CIG0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Depdc1aQ8CIG0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC23.1■■□□□ 1.29
Depdc1aQ8CIG0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Depdc1aQ8CIG0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Depdc1aQ8CIG0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Depdc1aQ8CIG0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Depdc1aQ8CIG0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Depdc1aQ8CIG0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Depdc1aQ8CIG0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Depdc1aQ8CIG0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Depdc1aQ8CIG0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Depdc1aQ8CIG0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Depdc1aQ8CIG0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms