Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
Sox30Q8CGW4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Sox30Q8CGW4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Sox30Q8CGW4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Sox30Q8CGW4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Sox30Q8CGW4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Sox30Q8CGW4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sox30Q8CGW4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sox30Q8CGW4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC22.53■■□□□ 1.2
Sox30Q8CGW4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sox30Q8CGW4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sox30Q8CGW4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sox30Q8CGW4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Sox30Q8CGW4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Sox30Q8CGW4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sox30Q8CGW4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sox30Q8CGW4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sox30Q8CGW4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC22.52■■□□□ 1.2
Sox30Q8CGW4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sox30Q8CGW4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Sox30Q8CGW4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Sox30Q8CGW4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sox30Q8CGW4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC22.51■■□□□ 1.19
Sox30Q8CGW4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
Sox30Q8CGW4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Sox30Q8CGW4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sox30Q8CGW4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC22.51■■□□□ 1.19
Sox30Q8CGW4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sox30Q8CGW4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Sox30Q8CGW4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sox30Q8CGW4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Sox30Q8CGW4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sox30Q8CGW4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.5■■□□□ 1.19
Sox30Q8CGW4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.5■■□□□ 1.19
Sox30Q8CGW4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Sox30Q8CGW4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sox30Q8CGW4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sox30Q8CGW4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.49■■□□□ 1.19
Sox30Q8CGW4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.49■■□□□ 1.19
Sox30Q8CGW4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sox30Q8CGW4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Sox30Q8CGW4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Sox30Q8CGW4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Sox30Q8CGW4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sox30Q8CGW4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Sox30Q8CGW4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Sox30Q8CGW4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Sox30Q8CGW4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Sox30Q8CGW4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC22.48■■□□□ 1.19
Sox30Q8CGW4 Iqck-206ENSMUST00000208658 2891 ntBASIC22.48■■□□□ 1.19
Sox30Q8CGW4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Sox30Q8CGW4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sox30Q8CGW4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Sox30Q8CGW4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sox30Q8CGW4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Sox30Q8CGW4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sox30Q8CGW4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sox30Q8CGW4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sox30Q8CGW4 Gm43545-201ENSMUST00000196765 2779 ntBASIC22.46■■□□□ 1.19
Sox30Q8CGW4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC22.46■■□□□ 1.19
Sox30Q8CGW4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sox30Q8CGW4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Sox30Q8CGW4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.46■■□□□ 1.19
Sox30Q8CGW4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Sox30Q8CGW4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sox30Q8CGW4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sox30Q8CGW4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Sox30Q8CGW4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sox30Q8CGW4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Sox30Q8CGW4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
Sox30Q8CGW4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sox30Q8CGW4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Sox30Q8CGW4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sox30Q8CGW4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sox30Q8CGW4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sox30Q8CGW4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sox30Q8CGW4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC22.44■■□□□ 1.18
Sox30Q8CGW4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sox30Q8CGW4 Mir6538-201ENSMUST00000183713 110 ntBASIC22.44■■□□□ 1.18
Sox30Q8CGW4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sox30Q8CGW4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sox30Q8CGW4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sox30Q8CGW4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sox30Q8CGW4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sox30Q8CGW4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sox30Q8CGW4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sox30Q8CGW4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sox30Q8CGW4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sox30Q8CGW4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Sox30Q8CGW4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Sox30Q8CGW4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sox30Q8CGW4 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.42■■□□□ 1.18
Sox30Q8CGW4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Sox30Q8CGW4 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.42■■□□□ 1.18
Sox30Q8CGW4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Sox30Q8CGW4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sox30Q8CGW4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC22.42■■□□□ 1.18
Sox30Q8CGW4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC22.42■■□□□ 1.18
Sox30Q8CGW4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sox30Q8CGW4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms