Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC25.31■■□□□ 1.64
Ptcd1Q8C2E4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ptcd1Q8C2E4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Ptcd1Q8C2E4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ptcd1Q8C2E4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC25.3■■□□□ 1.64
Ptcd1Q8C2E4 Gm26766-202ENSMUST00000227544 2347 ntBASIC25.3■■□□□ 1.64
Ptcd1Q8C2E4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC25.3■■□□□ 1.64
Ptcd1Q8C2E4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC25.3■■□□□ 1.64
Ptcd1Q8C2E4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC25.3■■□□□ 1.64
Ptcd1Q8C2E4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC25.3■■□□□ 1.64
Ptcd1Q8C2E4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ptcd1Q8C2E4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Ptcd1Q8C2E4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ptcd1Q8C2E4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ptcd1Q8C2E4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Ptcd1Q8C2E4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ptcd1Q8C2E4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ptcd1Q8C2E4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ptcd1Q8C2E4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ptcd1Q8C2E4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Ptcd1Q8C2E4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ptcd1Q8C2E4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Ptcd1Q8C2E4 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ptcd1Q8C2E4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Ptcd1Q8C2E4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ptcd1Q8C2E4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC25.27■■□□□ 1.64
Ptcd1Q8C2E4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ptcd1Q8C2E4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ptcd1Q8C2E4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ptcd1Q8C2E4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ptcd1Q8C2E4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Ptcd1Q8C2E4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC25.26■■□□□ 1.63
Ptcd1Q8C2E4 Gm4430-201ENSMUST00000192413 1943 ntBASIC25.26■■□□□ 1.63
Ptcd1Q8C2E4 Gm7160-202ENSMUST00000188519 1027 ntBASIC25.26■■□□□ 1.63
Ptcd1Q8C2E4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ptcd1Q8C2E4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC25.26■■□□□ 1.63
Ptcd1Q8C2E4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ptcd1Q8C2E4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Ptcd1Q8C2E4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC25.25■■□□□ 1.63
Ptcd1Q8C2E4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ptcd1Q8C2E4 Gm27011-201ENSMUST00000182352 972 ntBASIC25.25■■□□□ 1.63
Ptcd1Q8C2E4 Gm37179-201ENSMUST00000194862 823 ntBASIC25.25■■□□□ 1.63
Ptcd1Q8C2E4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ptcd1Q8C2E4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Ptcd1Q8C2E4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Ptcd1Q8C2E4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
Ptcd1Q8C2E4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ptcd1Q8C2E4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ptcd1Q8C2E4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ptcd1Q8C2E4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
Ptcd1Q8C2E4 AC099934.2-201ENSMUST00000196389 70 ntBASIC25.24■■□□□ 1.63
Ptcd1Q8C2E4 AC156953.1-201ENSMUST00000196953 70 ntBASIC25.24■■□□□ 1.63
Ptcd1Q8C2E4 AC157822.2-201ENSMUST00000200291 70 ntBASIC25.24■■□□□ 1.63
Ptcd1Q8C2E4 Gm7143-201ENSMUST00000222811 859 ntBASIC25.24■■□□□ 1.63
Ptcd1Q8C2E4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC25.23■■□□□ 1.63
Ptcd1Q8C2E4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ptcd1Q8C2E4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ptcd1Q8C2E4 Gm6085-201ENSMUST00000182774 1470 ntBASIC25.22■■□□□ 1.63
Ptcd1Q8C2E4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ptcd1Q8C2E4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Ptcd1Q8C2E4 Gm10849-201ENSMUST00000100397 618 ntBASIC25.22■■□□□ 1.63
Ptcd1Q8C2E4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ptcd1Q8C2E4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Ptcd1Q8C2E4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Ptcd1Q8C2E4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC25.22■■□□□ 1.63
Ptcd1Q8C2E4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ptcd1Q8C2E4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ptcd1Q8C2E4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ptcd1Q8C2E4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ptcd1Q8C2E4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC25.21■■□□□ 1.63
Ptcd1Q8C2E4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ptcd1Q8C2E4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Ptcd1Q8C2E4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ptcd1Q8C2E4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Ptcd1Q8C2E4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC25.21■■□□□ 1.63
Ptcd1Q8C2E4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ptcd1Q8C2E4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ptcd1Q8C2E4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC25.21■■□□□ 1.63
Ptcd1Q8C2E4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ptcd1Q8C2E4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ptcd1Q8C2E4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Ptcd1Q8C2E4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ptcd1Q8C2E4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ptcd1Q8C2E4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
Ptcd1Q8C2E4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ptcd1Q8C2E4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ptcd1Q8C2E4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC25.19■■□□□ 1.62
Ptcd1Q8C2E4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Ptcd1Q8C2E4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ptcd1Q8C2E4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ptcd1Q8C2E4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC25.19■■□□□ 1.62
Ptcd1Q8C2E4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Ptcd1Q8C2E4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ptcd1Q8C2E4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ptcd1Q8C2E4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ptcd1Q8C2E4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ptcd1Q8C2E4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC25.18■■□□□ 1.62
Ptcd1Q8C2E4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC25.18■■□□□ 1.62
Ptcd1Q8C2E4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Ptcd1Q8C2E4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms