Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.97■□□□□ 0.31
Tsen54Q8C2A2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Tsen54Q8C2A2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tsen54Q8C2A2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tsen54Q8C2A2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tsen54Q8C2A2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tsen54Q8C2A2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tsen54Q8C2A2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tsen54Q8C2A2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.97■□□□□ 0.31
Tsen54Q8C2A2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tsen54Q8C2A2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tsen54Q8C2A2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tsen54Q8C2A2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Tsen54Q8C2A2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tsen54Q8C2A2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tsen54Q8C2A2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tsen54Q8C2A2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tsen54Q8C2A2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tsen54Q8C2A2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tsen54Q8C2A2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tsen54Q8C2A2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tsen54Q8C2A2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tsen54Q8C2A2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.96■□□□□ 0.3
Tsen54Q8C2A2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tsen54Q8C2A2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tsen54Q8C2A2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tsen54Q8C2A2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Tsen54Q8C2A2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tsen54Q8C2A2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.95■□□□□ 0.3
Tsen54Q8C2A2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.95■□□□□ 0.3
Tsen54Q8C2A2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tsen54Q8C2A2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Tsen54Q8C2A2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tsen54Q8C2A2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tsen54Q8C2A2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tsen54Q8C2A2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Tsen54Q8C2A2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tsen54Q8C2A2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tsen54Q8C2A2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Tsen54Q8C2A2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tsen54Q8C2A2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.94■□□□□ 0.3
Tsen54Q8C2A2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tsen54Q8C2A2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Tsen54Q8C2A2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tsen54Q8C2A2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tsen54Q8C2A2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tsen54Q8C2A2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tsen54Q8C2A2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tsen54Q8C2A2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tsen54Q8C2A2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Tsen54Q8C2A2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tsen54Q8C2A2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tsen54Q8C2A2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tsen54Q8C2A2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tsen54Q8C2A2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.93■□□□□ 0.3
Tsen54Q8C2A2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tsen54Q8C2A2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Tsen54Q8C2A2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tsen54Q8C2A2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tsen54Q8C2A2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tsen54Q8C2A2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Tsen54Q8C2A2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Tsen54Q8C2A2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tsen54Q8C2A2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.92■□□□□ 0.3
Tsen54Q8C2A2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tsen54Q8C2A2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tsen54Q8C2A2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tsen54Q8C2A2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tsen54Q8C2A2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tsen54Q8C2A2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tsen54Q8C2A2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Tsen54Q8C2A2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tsen54Q8C2A2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tsen54Q8C2A2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.91■□□□□ 0.3
Tsen54Q8C2A2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Tsen54Q8C2A2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tsen54Q8C2A2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tsen54Q8C2A2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tsen54Q8C2A2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tsen54Q8C2A2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.9■□□□□ 0.3
Tsen54Q8C2A2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tsen54Q8C2A2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tsen54Q8C2A2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tsen54Q8C2A2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tsen54Q8C2A2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tsen54Q8C2A2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Tsen54Q8C2A2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.9■□□□□ 0.3
Tsen54Q8C2A2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tsen54Q8C2A2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Tsen54Q8C2A2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tsen54Q8C2A2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.89■□□□□ 0.3
Tsen54Q8C2A2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tsen54Q8C2A2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tsen54Q8C2A2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.89■□□□□ 0.29
Tsen54Q8C2A2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Tsen54Q8C2A2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tsen54Q8C2A2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tsen54Q8C2A2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Tsen54Q8C2A2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tsen54Q8C2A2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms