Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ska3Q8C263 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ska3Q8C263 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ska3Q8C263 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ska3Q8C263 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ska3Q8C263 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ska3Q8C263 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ska3Q8C263 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ska3Q8C263 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.18■□□□□ 0.66
Ska3Q8C263 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.18■□□□□ 0.66
Ska3Q8C263 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.18■□□□□ 0.66
Ska3Q8C263 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.18■□□□□ 0.66
Ska3Q8C263 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ska3Q8C263 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ska3Q8C263 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ska3Q8C263 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ska3Q8C263 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ska3Q8C263 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ska3Q8C263 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ska3Q8C263 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ska3Q8C263 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ska3Q8C263 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ska3Q8C263 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ska3Q8C263 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.17■□□□□ 0.66
Ska3Q8C263 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.17■□□□□ 0.66
Ska3Q8C263 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ska3Q8C263 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ska3Q8C263 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ska3Q8C263 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ska3Q8C263 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ska3Q8C263 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ska3Q8C263 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ska3Q8C263 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ska3Q8C263 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ska3Q8C263 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ska3Q8C263 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ska3Q8C263 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ska3Q8C263 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Ska3Q8C263 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.15■□□□□ 0.66
Ska3Q8C263 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
Ska3Q8C263 Gm7143-201ENSMUST00000222811 859 ntBASIC19.15■□□□□ 0.66
Ska3Q8C263 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ska3Q8C263 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ska3Q8C263 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ska3Q8C263 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.15■□□□□ 0.66
Ska3Q8C263 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.14■□□□□ 0.66
Ska3Q8C263 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ska3Q8C263 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ska3Q8C263 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ska3Q8C263 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ska3Q8C263 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ska3Q8C263 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ska3Q8C263 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.14■□□□□ 0.65
Ska3Q8C263 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ska3Q8C263 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ska3Q8C263 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ska3Q8C263 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ska3Q8C263 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ska3Q8C263 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ska3Q8C263 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.13■□□□□ 0.65
Ska3Q8C263 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.13■□□□□ 0.65
Ska3Q8C263 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Ska3Q8C263 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ska3Q8C263 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ska3Q8C263 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ska3Q8C263 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ska3Q8C263 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ska3Q8C263 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ska3Q8C263 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ska3Q8C263 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Ska3Q8C263 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ska3Q8C263 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ska3Q8C263 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ska3Q8C263 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ska3Q8C263 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ska3Q8C263 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ska3Q8C263 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ska3Q8C263 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.11■□□□□ 0.65
Ska3Q8C263 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Ska3Q8C263 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ska3Q8C263 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.11■□□□□ 0.65
Ska3Q8C263 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.11■□□□□ 0.65
Ska3Q8C263 Gm9870-201ENSMUST00000063874 645 ntBASIC19.11■□□□□ 0.65
Ska3Q8C263 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ska3Q8C263 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ska3Q8C263 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ska3Q8C263 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ska3Q8C263 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ska3Q8C263 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.1■□□□□ 0.65
Ska3Q8C263 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ska3Q8C263 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.1■□□□□ 0.65
Ska3Q8C263 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ska3Q8C263 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ska3Q8C263 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ska3Q8C263 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.1■□□□□ 0.65
Ska3Q8C263 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ska3Q8C263 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ska3Q8C263 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ska3Q8C263 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ska3Q8C263 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms