Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Cps1Q8C196 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Cps1Q8C196 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Cps1Q8C196 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Cps1Q8C196 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC28.23■■■□□ 2.11
Cps1Q8C196 Gm42642-201ENSMUST00000200683 355 ntBASIC28.23■■■□□ 2.11
Cps1Q8C196 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Cps1Q8C196 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Cps1Q8C196 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC28.22■■■□□ 2.11
Cps1Q8C196 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
Cps1Q8C196 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Cps1Q8C196 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Cps1Q8C196 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC28.22■■■□□ 2.11
Cps1Q8C196 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
Cps1Q8C196 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
Cps1Q8C196 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Cps1Q8C196 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Cps1Q8C196 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Cps1Q8C196 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Cps1Q8C196 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Cps1Q8C196 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Cps1Q8C196 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Cps1Q8C196 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC28.21■■■□□ 2.11
Cps1Q8C196 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Cps1Q8C196 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Cps1Q8C196 Gm27045-201ENSMUST00000182145 1402 ntBASIC28.2■■■□□ 2.11
Cps1Q8C196 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Cps1Q8C196 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Cps1Q8C196 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
Cps1Q8C196 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC28.2■■■□□ 2.1
Cps1Q8C196 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC28.19■■■□□ 2.1
Cps1Q8C196 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Cps1Q8C196 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
Cps1Q8C196 Il17rd-202ENSMUST00000223942 2186 ntBASIC28.19■■■□□ 2.1
Cps1Q8C196 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Cps1Q8C196 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Cps1Q8C196 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC28.19■■■□□ 2.1
Cps1Q8C196 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
Cps1Q8C196 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Cps1Q8C196 AC153962.1-201ENSMUST00000218530 1948 ntBASIC28.18■■■□□ 2.1
Cps1Q8C196 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Cps1Q8C196 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Cps1Q8C196 AC164883.3-201ENSMUST00000227396 1774 ntBASIC28.17■■■□□ 2.1
Cps1Q8C196 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC28.17■■■□□ 2.1
Cps1Q8C196 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Cps1Q8C196 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Cps1Q8C196 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Cps1Q8C196 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Cps1Q8C196 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC28.17■■■□□ 2.1
Cps1Q8C196 Spcs1-207ENSMUST00000228767 1008 ntBASIC28.17■■■□□ 2.1
Cps1Q8C196 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Cps1Q8C196 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC28.17■■■□□ 2.1
Cps1Q8C196 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Cps1Q8C196 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Cps1Q8C196 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Cps1Q8C196 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Cps1Q8C196 Gm18671-201ENSMUST00000214826 683 ntBASIC28.16■■■□□ 2.1
Cps1Q8C196 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Cps1Q8C196 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Cps1Q8C196 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
Cps1Q8C196 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
Cps1Q8C196 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
Cps1Q8C196 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Cps1Q8C196 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC28.15■■■□□ 2.1
Cps1Q8C196 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC28.15■■■□□ 2.1
Cps1Q8C196 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Cps1Q8C196 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.1
Cps1Q8C196 Gm42418-201ENSMUST00000182010 1831 ntBASIC28.14■■■□□ 2.1
Cps1Q8C196 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Cps1Q8C196 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.09
Cps1Q8C196 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Cps1Q8C196 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
Cps1Q8C196 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Cps1Q8C196 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Cps1Q8C196 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Cps1Q8C196 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Cps1Q8C196 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC28.13■■■□□ 2.09
Cps1Q8C196 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Cps1Q8C196 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Cps1Q8C196 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
Cps1Q8C196 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Cps1Q8C196 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Cps1Q8C196 CT025689.6-201ENSMUST00000224991 1104 ntBASIC28.12■■■□□ 2.09
Cps1Q8C196 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Cps1Q8C196 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Cps1Q8C196 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Cps1Q8C196 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
Cps1Q8C196 Gm11421-201ENSMUST00000122124 294 ntBASIC28.11■■■□□ 2.09
Cps1Q8C196 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Cps1Q8C196 AV356131-201ENSMUST00000206201 750 ntBASIC28.11■■■□□ 2.09
Cps1Q8C196 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
Cps1Q8C196 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Cps1Q8C196 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Cps1Q8C196 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Cps1Q8C196 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Cps1Q8C196 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Cps1Q8C196 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
Cps1Q8C196 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Cps1Q8C196 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Cps1Q8C196 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms