Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Usp43Q8BUM9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp43Q8BUM9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp43Q8BUM9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp43Q8BUM9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp43Q8BUM9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp43Q8BUM9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp43Q8BUM9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp43Q8BUM9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Usp43Q8BUM9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp43Q8BUM9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp43Q8BUM9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp43Q8BUM9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp43Q8BUM9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.74■□□□□ 0.91
Usp43Q8BUM9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp43Q8BUM9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.74■□□□□ 0.91
Usp43Q8BUM9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp43Q8BUM9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Usp43Q8BUM9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp43Q8BUM9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp43Q8BUM9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp43Q8BUM9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp43Q8BUM9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp43Q8BUM9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp43Q8BUM9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp43Q8BUM9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp43Q8BUM9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Usp43Q8BUM9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp43Q8BUM9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Usp43Q8BUM9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Usp43Q8BUM9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp43Q8BUM9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp43Q8BUM9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp43Q8BUM9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp43Q8BUM9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp43Q8BUM9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp43Q8BUM9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Usp43Q8BUM9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp43Q8BUM9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.72■□□□□ 0.91
Usp43Q8BUM9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp43Q8BUM9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp43Q8BUM9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Usp43Q8BUM9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp43Q8BUM9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Usp43Q8BUM9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Usp43Q8BUM9 Gm45102-201ENSMUST00000207427 857 ntBASIC20.71■□□□□ 0.91
Usp43Q8BUM9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Usp43Q8BUM9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Usp43Q8BUM9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp43Q8BUM9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp43Q8BUM9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp43Q8BUM9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Usp43Q8BUM9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp43Q8BUM9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Usp43Q8BUM9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp43Q8BUM9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Usp43Q8BUM9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Usp43Q8BUM9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.7■□□□□ 0.9
Usp43Q8BUM9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp43Q8BUM9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp43Q8BUM9 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.69■□□□□ 0.9
Usp43Q8BUM9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp43Q8BUM9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Usp43Q8BUM9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp43Q8BUM9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Usp43Q8BUM9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp43Q8BUM9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp43Q8BUM9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp43Q8BUM9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.68■□□□□ 0.9
Usp43Q8BUM9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp43Q8BUM9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp43Q8BUM9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp43Q8BUM9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp43Q8BUM9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.68■□□□□ 0.9
Usp43Q8BUM9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp43Q8BUM9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Usp43Q8BUM9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.68■□□□□ 0.9
Usp43Q8BUM9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp43Q8BUM9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp43Q8BUM9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Usp43Q8BUM9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.67■□□□□ 0.9
Usp43Q8BUM9 Gm14117-201ENSMUST00000122417 843 ntBASIC20.67■□□□□ 0.9
Usp43Q8BUM9 Rps24-207ENSMUST00000224568 714 ntBASIC20.67■□□□□ 0.9
Usp43Q8BUM9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp43Q8BUM9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp43Q8BUM9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp43Q8BUM9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp43Q8BUM9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.66■□□□□ 0.9
Usp43Q8BUM9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Usp43Q8BUM9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Usp43Q8BUM9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.66■□□□□ 0.9
Usp43Q8BUM9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp43Q8BUM9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp43Q8BUM9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp43Q8BUM9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp43Q8BUM9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp43Q8BUM9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp43Q8BUM9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
Usp43Q8BUM9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.65■□□□□ 0.9
Usp43Q8BUM9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms