Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ckap4Q8BMK4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ckap4Q8BMK4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Ckap4Q8BMK4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ckap4Q8BMK4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ckap4Q8BMK4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ckap4Q8BMK4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ckap4Q8BMK4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ckap4Q8BMK4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ckap4Q8BMK4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ckap4Q8BMK4 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.23■□□□□ 0.67
Ckap4Q8BMK4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ckap4Q8BMK4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ckap4Q8BMK4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.22■□□□□ 0.67
Ckap4Q8BMK4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ckap4Q8BMK4 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.22■□□□□ 0.67
Ckap4Q8BMK4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.22■□□□□ 0.67
Ckap4Q8BMK4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Ckap4Q8BMK4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ckap4Q8BMK4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ckap4Q8BMK4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ckap4Q8BMK4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ckap4Q8BMK4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.21■□□□□ 0.67
Ckap4Q8BMK4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.21■□□□□ 0.67
Ckap4Q8BMK4 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.21■□□□□ 0.67
Ckap4Q8BMK4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ckap4Q8BMK4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ckap4Q8BMK4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ckap4Q8BMK4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ckap4Q8BMK4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ckap4Q8BMK4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Ckap4Q8BMK4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Ckap4Q8BMK4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ckap4Q8BMK4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ckap4Q8BMK4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ckap4Q8BMK4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ckap4Q8BMK4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ckap4Q8BMK4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Ckap4Q8BMK4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ckap4Q8BMK4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ckap4Q8BMK4 Gm43566-201ENSMUST00000196851 808 ntBASIC19.2■□□□□ 0.66
Ckap4Q8BMK4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ckap4Q8BMK4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ckap4Q8BMK4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ckap4Q8BMK4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ckap4Q8BMK4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.19■□□□□ 0.66
Ckap4Q8BMK4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.19■□□□□ 0.66
Ckap4Q8BMK4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.19■□□□□ 0.66
Ckap4Q8BMK4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
Ckap4Q8BMK4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ckap4Q8BMK4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ckap4Q8BMK4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ckap4Q8BMK4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.19■□□□□ 0.66
Ckap4Q8BMK4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ckap4Q8BMK4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ckap4Q8BMK4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ckap4Q8BMK4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ckap4Q8BMK4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ckap4Q8BMK4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ckap4Q8BMK4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ckap4Q8BMK4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ckap4Q8BMK4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ckap4Q8BMK4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ckap4Q8BMK4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ckap4Q8BMK4 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ckap4Q8BMK4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.18■□□□□ 0.66
Ckap4Q8BMK4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ckap4Q8BMK4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ckap4Q8BMK4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ckap4Q8BMK4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ckap4Q8BMK4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.17■□□□□ 0.66
Ckap4Q8BMK4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ckap4Q8BMK4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.17■□□□□ 0.66
Ckap4Q8BMK4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ckap4Q8BMK4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ckap4Q8BMK4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Ckap4Q8BMK4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ckap4Q8BMK4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ckap4Q8BMK4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ckap4Q8BMK4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.16■□□□□ 0.66
Ckap4Q8BMK4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.16■□□□□ 0.66
Ckap4Q8BMK4 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ckap4Q8BMK4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ckap4Q8BMK4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ckap4Q8BMK4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ckap4Q8BMK4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ckap4Q8BMK4 Golph3-202ENSMUST00000226517 2359 ntBASIC19.15■□□□□ 0.66
Ckap4Q8BMK4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.15■□□□□ 0.66
Ckap4Q8BMK4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ckap4Q8BMK4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ckap4Q8BMK4 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.15■□□□□ 0.66
Ckap4Q8BMK4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ckap4Q8BMK4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ckap4Q8BMK4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ckap4Q8BMK4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ckap4Q8BMK4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.15■□□□□ 0.66
Ckap4Q8BMK4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ckap4Q8BMK4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ckap4Q8BMK4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ckap4Q8BMK4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms