Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Trim23Q8BGX0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim23Q8BGX0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Trim23Q8BGX0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim23Q8BGX0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.75■□□□□ 0.75
Trim23Q8BGX0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim23Q8BGX0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim23Q8BGX0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim23Q8BGX0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim23Q8BGX0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim23Q8BGX0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim23Q8BGX0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trim23Q8BGX0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim23Q8BGX0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim23Q8BGX0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim23Q8BGX0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trim23Q8BGX0 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.73■□□□□ 0.75
Trim23Q8BGX0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Trim23Q8BGX0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim23Q8BGX0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.73■□□□□ 0.75
Trim23Q8BGX0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim23Q8BGX0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim23Q8BGX0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim23Q8BGX0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim23Q8BGX0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim23Q8BGX0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.72■□□□□ 0.75
Trim23Q8BGX0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim23Q8BGX0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim23Q8BGX0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim23Q8BGX0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim23Q8BGX0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim23Q8BGX0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim23Q8BGX0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim23Q8BGX0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim23Q8BGX0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim23Q8BGX0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim23Q8BGX0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim23Q8BGX0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim23Q8BGX0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim23Q8BGX0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim23Q8BGX0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Trim23Q8BGX0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim23Q8BGX0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim23Q8BGX0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim23Q8BGX0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Trim23Q8BGX0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Trim23Q8BGX0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
Trim23Q8BGX0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim23Q8BGX0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim23Q8BGX0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.69■□□□□ 0.74
Trim23Q8BGX0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim23Q8BGX0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim23Q8BGX0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trim23Q8BGX0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.69■□□□□ 0.74
Trim23Q8BGX0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim23Q8BGX0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim23Q8BGX0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim23Q8BGX0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.68■□□□□ 0.74
Trim23Q8BGX0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim23Q8BGX0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim23Q8BGX0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim23Q8BGX0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim23Q8BGX0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim23Q8BGX0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim23Q8BGX0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.67■□□□□ 0.74
Trim23Q8BGX0 Gm43530-201ENSMUST00000195920 274 ntBASIC19.67■□□□□ 0.74
Trim23Q8BGX0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.67■□□□□ 0.74
Trim23Q8BGX0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim23Q8BGX0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim23Q8BGX0 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.67■□□□□ 0.74
Trim23Q8BGX0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim23Q8BGX0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim23Q8BGX0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim23Q8BGX0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim23Q8BGX0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim23Q8BGX0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim23Q8BGX0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim23Q8BGX0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim23Q8BGX0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim23Q8BGX0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim23Q8BGX0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim23Q8BGX0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim23Q8BGX0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim23Q8BGX0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim23Q8BGX0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.65■□□□□ 0.74
Trim23Q8BGX0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trim23Q8BGX0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trim23Q8BGX0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim23Q8BGX0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.64■□□□□ 0.73
Trim23Q8BGX0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim23Q8BGX0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim23Q8BGX0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim23Q8BGX0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim23Q8BGX0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim23Q8BGX0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Trim23Q8BGX0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim23Q8BGX0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim23Q8BGX0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.63■□□□□ 0.73
Trim23Q8BGX0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim23Q8BGX0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms