Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atg4bQ8BGE6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atg4bQ8BGE6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atg4bQ8BGE6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atg4bQ8BGE6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.27■□□□□ 0.68
Atg4bQ8BGE6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Atg4bQ8BGE6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.27■□□□□ 0.68
Atg4bQ8BGE6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Atg4bQ8BGE6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Atg4bQ8BGE6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atg4bQ8BGE6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atg4bQ8BGE6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atg4bQ8BGE6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.26■□□□□ 0.67
Atg4bQ8BGE6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.26■□□□□ 0.67
Atg4bQ8BGE6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atg4bQ8BGE6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atg4bQ8BGE6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Atg4bQ8BGE6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg4bQ8BGE6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Atg4bQ8BGE6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Atg4bQ8BGE6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg4bQ8BGE6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg4bQ8BGE6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Atg4bQ8BGE6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg4bQ8BGE6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg4bQ8BGE6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg4bQ8BGE6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atg4bQ8BGE6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atg4bQ8BGE6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atg4bQ8BGE6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atg4bQ8BGE6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Atg4bQ8BGE6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atg4bQ8BGE6 Gm22238-201ENSMUST00000175222 88 ntBASIC19.24■□□□□ 0.67
Atg4bQ8BGE6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Atg4bQ8BGE6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.24■□□□□ 0.67
Atg4bQ8BGE6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atg4bQ8BGE6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atg4bQ8BGE6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Atg4bQ8BGE6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atg4bQ8BGE6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atg4bQ8BGE6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Atg4bQ8BGE6 Gm7143-201ENSMUST00000222811 859 ntBASIC19.23■□□□□ 0.67
Atg4bQ8BGE6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atg4bQ8BGE6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atg4bQ8BGE6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atg4bQ8BGE6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atg4bQ8BGE6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atg4bQ8BGE6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atg4bQ8BGE6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atg4bQ8BGE6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atg4bQ8BGE6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Atg4bQ8BGE6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Atg4bQ8BGE6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atg4bQ8BGE6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.21■□□□□ 0.67
Atg4bQ8BGE6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atg4bQ8BGE6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.21■□□□□ 0.67
Atg4bQ8BGE6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Atg4bQ8BGE6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Atg4bQ8BGE6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atg4bQ8BGE6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Atg4bQ8BGE6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atg4bQ8BGE6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Atg4bQ8BGE6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atg4bQ8BGE6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atg4bQ8BGE6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atg4bQ8BGE6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.2■□□□□ 0.66
Atg4bQ8BGE6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Atg4bQ8BGE6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Atg4bQ8BGE6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atg4bQ8BGE6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atg4bQ8BGE6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Atg4bQ8BGE6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Atg4bQ8BGE6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atg4bQ8BGE6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atg4bQ8BGE6 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.19■□□□□ 0.66
Atg4bQ8BGE6 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.19■□□□□ 0.66
Atg4bQ8BGE6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
Atg4bQ8BGE6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.19■□□□□ 0.66
Atg4bQ8BGE6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Atg4bQ8BGE6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atg4bQ8BGE6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
Atg4bQ8BGE6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atg4bQ8BGE6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atg4bQ8BGE6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atg4bQ8BGE6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.18■□□□□ 0.66
Atg4bQ8BGE6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atg4bQ8BGE6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atg4bQ8BGE6 Gm9870-201ENSMUST00000063874 645 ntBASIC19.18■□□□□ 0.66
Atg4bQ8BGE6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atg4bQ8BGE6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atg4bQ8BGE6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Atg4bQ8BGE6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atg4bQ8BGE6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atg4bQ8BGE6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atg4bQ8BGE6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.17■□□□□ 0.66
Atg4bQ8BGE6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Atg4bQ8BGE6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Atg4bQ8BGE6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.17■□□□□ 0.66
Atg4bQ8BGE6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atg4bQ8BGE6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms