Protein–RNA interactions for Protein: Q8BGA5

Krr1, KRR1 small subunit processome component homolog, mousemouse

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krr1Q8BGA5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Krr1Q8BGA5 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krr1Q8BGA5 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.19■□□□□ 0.66
Krr1Q8BGA5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krr1Q8BGA5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krr1Q8BGA5 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krr1Q8BGA5 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krr1Q8BGA5 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Krr1Q8BGA5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Krr1Q8BGA5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krr1Q8BGA5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krr1Q8BGA5 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Krr1Q8BGA5 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krr1Q8BGA5 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.18■□□□□ 0.66
Krr1Q8BGA5 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Krr1Q8BGA5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Krr1Q8BGA5 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Krr1Q8BGA5 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krr1Q8BGA5 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.18■□□□□ 0.66
Krr1Q8BGA5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Krr1Q8BGA5 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Krr1Q8BGA5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Krr1Q8BGA5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Krr1Q8BGA5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krr1Q8BGA5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krr1Q8BGA5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Krr1Q8BGA5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krr1Q8BGA5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Krr1Q8BGA5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Krr1Q8BGA5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krr1Q8BGA5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Krr1Q8BGA5 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.17■□□□□ 0.66
Krr1Q8BGA5 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krr1Q8BGA5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krr1Q8BGA5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krr1Q8BGA5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Krr1Q8BGA5 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krr1Q8BGA5 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Krr1Q8BGA5 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krr1Q8BGA5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krr1Q8BGA5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Krr1Q8BGA5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Krr1Q8BGA5 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Krr1Q8BGA5 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krr1Q8BGA5 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
Krr1Q8BGA5 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.15■□□□□ 0.66
Krr1Q8BGA5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Krr1Q8BGA5 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Krr1Q8BGA5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krr1Q8BGA5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Krr1Q8BGA5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krr1Q8BGA5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Krr1Q8BGA5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krr1Q8BGA5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krr1Q8BGA5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krr1Q8BGA5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.14■□□□□ 0.66
Krr1Q8BGA5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Krr1Q8BGA5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Krr1Q8BGA5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.14■□□□□ 0.65
Krr1Q8BGA5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Krr1Q8BGA5 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Krr1Q8BGA5 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.14■□□□□ 0.65
Krr1Q8BGA5 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.14■□□□□ 0.65
Krr1Q8BGA5 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.14■□□□□ 0.65
Krr1Q8BGA5 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.14■□□□□ 0.65
Krr1Q8BGA5 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.14■□□□□ 0.65
Krr1Q8BGA5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.14■□□□□ 0.65
Krr1Q8BGA5 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Krr1Q8BGA5 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Krr1Q8BGA5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Krr1Q8BGA5 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Krr1Q8BGA5 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Krr1Q8BGA5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Krr1Q8BGA5 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Krr1Q8BGA5 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Krr1Q8BGA5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Krr1Q8BGA5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Krr1Q8BGA5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.12■□□□□ 0.65
Krr1Q8BGA5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Krr1Q8BGA5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Krr1Q8BGA5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Krr1Q8BGA5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Krr1Q8BGA5 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Krr1Q8BGA5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Krr1Q8BGA5 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Krr1Q8BGA5 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Krr1Q8BGA5 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Krr1Q8BGA5 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.12■□□□□ 0.65
Krr1Q8BGA5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Krr1Q8BGA5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.11■□□□□ 0.65
Krr1Q8BGA5 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Krr1Q8BGA5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Krr1Q8BGA5 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Krr1Q8BGA5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Krr1Q8BGA5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.11■□□□□ 0.65
Krr1Q8BGA5 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.11■□□□□ 0.65
Krr1Q8BGA5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Krr1Q8BGA5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Krr1Q8BGA5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Krr1Q8BGA5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms