Protein–RNA interactions for Protein: Q7TNM2

Trim46, Tripartite motif-containing protein 46, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim46Q7TNM2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trim46Q7TNM2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Trim46Q7TNM2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim46Q7TNM2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.18■□□□□ 0.66
Trim46Q7TNM2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim46Q7TNM2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim46Q7TNM2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim46Q7TNM2 Gm15546-201ENSMUST00000122095 826 ntBASIC19.18■□□□□ 0.66
Trim46Q7TNM2 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.18■□□□□ 0.66
Trim46Q7TNM2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trim46Q7TNM2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim46Q7TNM2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim46Q7TNM2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trim46Q7TNM2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim46Q7TNM2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Trim46Q7TNM2 Notumos-201ENSMUST00000151998 2659 ntBASIC19.18■□□□□ 0.66
Trim46Q7TNM2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim46Q7TNM2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim46Q7TNM2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim46Q7TNM2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim46Q7TNM2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trim46Q7TNM2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim46Q7TNM2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim46Q7TNM2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim46Q7TNM2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim46Q7TNM2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim46Q7TNM2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim46Q7TNM2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim46Q7TNM2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim46Q7TNM2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.16■□□□□ 0.66
Trim46Q7TNM2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.16■□□□□ 0.66
Trim46Q7TNM2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim46Q7TNM2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim46Q7TNM2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Trim46Q7TNM2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim46Q7TNM2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trim46Q7TNM2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim46Q7TNM2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trim46Q7TNM2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim46Q7TNM2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim46Q7TNM2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim46Q7TNM2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim46Q7TNM2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim46Q7TNM2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim46Q7TNM2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim46Q7TNM2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
Trim46Q7TNM2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.14■□□□□ 0.65
Trim46Q7TNM2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim46Q7TNM2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim46Q7TNM2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim46Q7TNM2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.14■□□□□ 0.65
Trim46Q7TNM2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim46Q7TNM2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim46Q7TNM2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim46Q7TNM2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim46Q7TNM2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.13■□□□□ 0.65
Trim46Q7TNM2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim46Q7TNM2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.13■□□□□ 0.65
Trim46Q7TNM2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim46Q7TNM2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim46Q7TNM2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim46Q7TNM2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim46Q7TNM2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.13■□□□□ 0.65
Trim46Q7TNM2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim46Q7TNM2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim46Q7TNM2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Trim46Q7TNM2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim46Q7TNM2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim46Q7TNM2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim46Q7TNM2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trim46Q7TNM2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.12■□□□□ 0.65
Trim46Q7TNM2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.12■□□□□ 0.65
Trim46Q7TNM2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.12■□□□□ 0.65
Trim46Q7TNM2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim46Q7TNM2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trim46Q7TNM2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim46Q7TNM2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim46Q7TNM2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim46Q7TNM2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim46Q7TNM2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim46Q7TNM2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim46Q7TNM2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim46Q7TNM2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.11■□□□□ 0.65
Trim46Q7TNM2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim46Q7TNM2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Trim46Q7TNM2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Trim46Q7TNM2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim46Q7TNM2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim46Q7TNM2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim46Q7TNM2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim46Q7TNM2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Trim46Q7TNM2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim46Q7TNM2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim46Q7TNM2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim46Q7TNM2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim46Q7TNM2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim46Q7TNM2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Trim46Q7TNM2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim46Q7TNM2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Trim46Q7TNM2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms