Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Rfx4Q7TNK1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rfx4Q7TNK1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rfx4Q7TNK1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx4Q7TNK1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Rfx4Q7TNK1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx4Q7TNK1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx4Q7TNK1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx4Q7TNK1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx4Q7TNK1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx4Q7TNK1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx4Q7TNK1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfx4Q7TNK1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.58■□□□□ 0.73
Rfx4Q7TNK1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
Rfx4Q7TNK1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rfx4Q7TNK1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Rfx4Q7TNK1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.58■□□□□ 0.73
Rfx4Q7TNK1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.58■□□□□ 0.72
Rfx4Q7TNK1 Gm6311-201ENSMUST00000073790 878 ntBASIC19.58■□□□□ 0.72
Rfx4Q7TNK1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rfx4Q7TNK1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rfx4Q7TNK1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx4Q7TNK1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx4Q7TNK1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx4Q7TNK1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx4Q7TNK1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx4Q7TNK1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.57■□□□□ 0.72
Rfx4Q7TNK1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx4Q7TNK1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx4Q7TNK1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx4Q7TNK1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx4Q7TNK1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx4Q7TNK1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfx4Q7TNK1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfx4Q7TNK1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfx4Q7TNK1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.56■□□□□ 0.72
Rfx4Q7TNK1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Rfx4Q7TNK1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rfx4Q7TNK1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Rfx4Q7TNK1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rfx4Q7TNK1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rfx4Q7TNK1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rfx4Q7TNK1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfx4Q7TNK1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfx4Q7TNK1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfx4Q7TNK1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Rfx4Q7TNK1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfx4Q7TNK1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Rfx4Q7TNK1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.54■□□□□ 0.72
Rfx4Q7TNK1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Rfx4Q7TNK1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfx4Q7TNK1 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.54■□□□□ 0.72
Rfx4Q7TNK1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfx4Q7TNK1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfx4Q7TNK1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rfx4Q7TNK1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rfx4Q7TNK1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rfx4Q7TNK1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rfx4Q7TNK1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rfx4Q7TNK1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Rfx4Q7TNK1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rfx4Q7TNK1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rfx4Q7TNK1 Gm9806-201ENSMUST00000051080 552 ntBASIC19.53■□□□□ 0.72
Rfx4Q7TNK1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.53■□□□□ 0.72
Rfx4Q7TNK1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Rfx4Q7TNK1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rfx4Q7TNK1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Rfx4Q7TNK1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rfx4Q7TNK1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rfx4Q7TNK1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rfx4Q7TNK1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rfx4Q7TNK1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rfx4Q7TNK1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rfx4Q7TNK1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rfx4Q7TNK1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfx4Q7TNK1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.51■□□□□ 0.71
Rfx4Q7TNK1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.51■□□□□ 0.71
Rfx4Q7TNK1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.51■□□□□ 0.71
Rfx4Q7TNK1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.51■□□□□ 0.71
Rfx4Q7TNK1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfx4Q7TNK1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rfx4Q7TNK1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.51■□□□□ 0.71
Rfx4Q7TNK1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfx4Q7TNK1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfx4Q7TNK1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfx4Q7TNK1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfx4Q7TNK1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfx4Q7TNK1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfx4Q7TNK1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rfx4Q7TNK1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfx4Q7TNK1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rfx4Q7TNK1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rfx4Q7TNK1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.5■□□□□ 0.71
Rfx4Q7TNK1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rfx4Q7TNK1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Rfx4Q7TNK1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rfx4Q7TNK1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rfx4Q7TNK1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rfx4Q7TNK1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfx4Q7TNK1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms