Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.64
Timd4Q6U7R4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Timd4Q6U7R4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Timd4Q6U7R4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Timd4Q6U7R4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Timd4Q6U7R4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Timd4Q6U7R4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Timd4Q6U7R4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Timd4Q6U7R4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Timd4Q6U7R4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.01■□□□□ 0.63
Timd4Q6U7R4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Timd4Q6U7R4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Timd4Q6U7R4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Timd4Q6U7R4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Timd4Q6U7R4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.01■□□□□ 0.63
Timd4Q6U7R4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Timd4Q6U7R4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Timd4Q6U7R4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Timd4Q6U7R4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Timd4Q6U7R4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Timd4Q6U7R4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.01■□□□□ 0.63
Timd4Q6U7R4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Timd4Q6U7R4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Timd4Q6U7R4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Timd4Q6U7R4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19■□□□□ 0.63
Timd4Q6U7R4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Timd4Q6U7R4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Timd4Q6U7R4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Timd4Q6U7R4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Timd4Q6U7R4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Timd4Q6U7R4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Timd4Q6U7R4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Timd4Q6U7R4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Timd4Q6U7R4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.99■□□□□ 0.63
Timd4Q6U7R4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Timd4Q6U7R4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Timd4Q6U7R4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Timd4Q6U7R4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Timd4Q6U7R4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Timd4Q6U7R4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.98■□□□□ 0.63
Timd4Q6U7R4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Timd4Q6U7R4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.98■□□□□ 0.63
Timd4Q6U7R4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Timd4Q6U7R4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Timd4Q6U7R4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Timd4Q6U7R4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Timd4Q6U7R4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Timd4Q6U7R4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Timd4Q6U7R4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Timd4Q6U7R4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.97■□□□□ 0.63
Timd4Q6U7R4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.97■□□□□ 0.63
Timd4Q6U7R4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Timd4Q6U7R4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Timd4Q6U7R4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Timd4Q6U7R4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Timd4Q6U7R4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Timd4Q6U7R4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Timd4Q6U7R4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Timd4Q6U7R4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Timd4Q6U7R4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
Timd4Q6U7R4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Timd4Q6U7R4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Timd4Q6U7R4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Timd4Q6U7R4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Timd4Q6U7R4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Timd4Q6U7R4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Timd4Q6U7R4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.95■□□□□ 0.62
Timd4Q6U7R4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.95■□□□□ 0.62
Timd4Q6U7R4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Timd4Q6U7R4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.95■□□□□ 0.62
Timd4Q6U7R4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Timd4Q6U7R4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Timd4Q6U7R4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Timd4Q6U7R4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Timd4Q6U7R4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Timd4Q6U7R4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Timd4Q6U7R4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Timd4Q6U7R4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Timd4Q6U7R4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Timd4Q6U7R4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Timd4Q6U7R4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Timd4Q6U7R4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Timd4Q6U7R4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Timd4Q6U7R4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Timd4Q6U7R4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Timd4Q6U7R4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Timd4Q6U7R4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.94■□□□□ 0.62
Timd4Q6U7R4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.94■□□□□ 0.62
Timd4Q6U7R4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Timd4Q6U7R4 Gm7143-201ENSMUST00000222811 859 ntBASIC18.94■□□□□ 0.62
Timd4Q6U7R4 Gm9870-201ENSMUST00000063874 645 ntBASIC18.94■□□□□ 0.62
Timd4Q6U7R4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Timd4Q6U7R4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Timd4Q6U7R4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Timd4Q6U7R4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Timd4Q6U7R4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Timd4Q6U7R4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.93■□□□□ 0.62
Timd4Q6U7R4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.93■□□□□ 0.62
Timd4Q6U7R4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Timd4Q6U7R4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms