Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ddx58Q6Q899 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ddx58Q6Q899 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ddx58Q6Q899 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ddx58Q6Q899 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ddx58Q6Q899 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Ddx58Q6Q899 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ddx58Q6Q899 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ddx58Q6Q899 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
Ddx58Q6Q899 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ddx58Q6Q899 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ddx58Q6Q899 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Ddx58Q6Q899 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ddx58Q6Q899 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC25.41■■□□□ 1.66
Ddx58Q6Q899 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ddx58Q6Q899 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ddx58Q6Q899 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC25.4■■□□□ 1.66
Ddx58Q6Q899 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Ddx58Q6Q899 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Ddx58Q6Q899 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC25.4■■□□□ 1.66
Ddx58Q6Q899 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC25.4■■□□□ 1.66
Ddx58Q6Q899 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
Ddx58Q6Q899 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Ddx58Q6Q899 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
Ddx58Q6Q899 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC25.39■■□□□ 1.66
Ddx58Q6Q899 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Ddx58Q6Q899 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Ddx58Q6Q899 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Ddx58Q6Q899 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ddx58Q6Q899 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ddx58Q6Q899 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Ddx58Q6Q899 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ddx58Q6Q899 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
Ddx58Q6Q899 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC25.38■■□□□ 1.65
Ddx58Q6Q899 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC25.38■■□□□ 1.65
Ddx58Q6Q899 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ddx58Q6Q899 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ddx58Q6Q899 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC25.37■■□□□ 1.65
Ddx58Q6Q899 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC25.37■■□□□ 1.65
Ddx58Q6Q899 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ddx58Q6Q899 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ddx58Q6Q899 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Ddx58Q6Q899 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ddx58Q6Q899 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ddx58Q6Q899 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC25.37■■□□□ 1.65
Ddx58Q6Q899 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ddx58Q6Q899 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ddx58Q6Q899 Gm8493-201ENSMUST00000196881 489 ntBASIC25.37■■□□□ 1.65
Ddx58Q6Q899 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC25.37■■□□□ 1.65
Ddx58Q6Q899 Wdr70-203ENSMUST00000227371 1130 ntBASIC25.37■■□□□ 1.65
Ddx58Q6Q899 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ddx58Q6Q899 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC25.37■■□□□ 1.65
Ddx58Q6Q899 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC25.36■■□□□ 1.65
Ddx58Q6Q899 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ddx58Q6Q899 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ddx58Q6Q899 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Ddx58Q6Q899 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Ddx58Q6Q899 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ddx58Q6Q899 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ddx58Q6Q899 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ddx58Q6Q899 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Ddx58Q6Q899 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Ddx58Q6Q899 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ddx58Q6Q899 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC25.35■■□□□ 1.65
Ddx58Q6Q899 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Ddx58Q6Q899 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Ddx58Q6Q899 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Ddx58Q6Q899 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ddx58Q6Q899 Gm12251-201ENSMUST00000117893 792 ntBASIC25.34■■□□□ 1.65
Ddx58Q6Q899 Gm2011-201ENSMUST00000203124 1263 ntBASIC25.34■■□□□ 1.65
Ddx58Q6Q899 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ddx58Q6Q899 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Ddx58Q6Q899 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ddx58Q6Q899 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Ddx58Q6Q899 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ddx58Q6Q899 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Ddx58Q6Q899 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ddx58Q6Q899 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ddx58Q6Q899 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ddx58Q6Q899 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.64
Ddx58Q6Q899 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Ddx58Q6Q899 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.64
Ddx58Q6Q899 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Ddx58Q6Q899 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Ddx58Q6Q899 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC25.32■■□□□ 1.64
Ddx58Q6Q899 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC25.32■■□□□ 1.64
Ddx58Q6Q899 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Ddx58Q6Q899 Gm43017-201ENSMUST00000198296 752 ntBASIC25.32■■□□□ 1.64
Ddx58Q6Q899 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ddx58Q6Q899 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ddx58Q6Q899 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ddx58Q6Q899 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ddx58Q6Q899 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ddx58Q6Q899 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
Ddx58Q6Q899 Gm43173-201ENSMUST00000202246 593 ntBASIC25.31■■□□□ 1.64
Ddx58Q6Q899 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ddx58Q6Q899 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ddx58Q6Q899 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Ddx58Q6Q899 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ddx58Q6Q899 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms