Protein–RNA interactions for Protein: Q62395

Tff3, Trefoil factor 3, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff3Q62395 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tff3Q62395 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tff3Q62395 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.74■□□□□ 0.43
Tff3Q62395 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tff3Q62395 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tff3Q62395 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Tff3Q62395 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tff3Q62395 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tff3Q62395 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tff3Q62395 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tff3Q62395 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tff3Q62395 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tff3Q62395 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.73■□□□□ 0.43
Tff3Q62395 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.72■□□□□ 0.43
Tff3Q62395 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tff3Q62395 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tff3Q62395 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Tff3Q62395 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tff3Q62395 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Tff3Q62395 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.71■□□□□ 0.43
Tff3Q62395 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tff3Q62395 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Tff3Q62395 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tff3Q62395 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
Tff3Q62395 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Tff3Q62395 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tff3Q62395 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Tff3Q62395 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.71■□□□□ 0.43
Tff3Q62395 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Tff3Q62395 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tff3Q62395 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.7■□□□□ 0.42
Tff3Q62395 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tff3Q62395 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tff3Q62395 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tff3Q62395 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Tff3Q62395 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.7■□□□□ 0.42
Tff3Q62395 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tff3Q62395 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tff3Q62395 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tff3Q62395 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tff3Q62395 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tff3Q62395 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tff3Q62395 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tff3Q62395 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tff3Q62395 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tff3Q62395 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tff3Q62395 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tff3Q62395 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tff3Q62395 Mir7075-201ENSMUST00000184187 82 ntBASIC17.69■□□□□ 0.42
Tff3Q62395 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Tff3Q62395 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Tff3Q62395 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tff3Q62395 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tff3Q62395 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tff3Q62395 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tff3Q62395 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Tff3Q62395 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tff3Q62395 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.68■□□□□ 0.42
Tff3Q62395 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Tff3Q62395 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
Tff3Q62395 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tff3Q62395 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Tff3Q62395 Gm43530-201ENSMUST00000195920 274 ntBASIC17.67■□□□□ 0.42
Tff3Q62395 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tff3Q62395 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tff3Q62395 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.67■□□□□ 0.42
Tff3Q62395 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tff3Q62395 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.66■□□□□ 0.42
Tff3Q62395 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tff3Q62395 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Tff3Q62395 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.66■□□□□ 0.42
Tff3Q62395 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.66■□□□□ 0.42
Tff3Q62395 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tff3Q62395 Gm6139-201ENSMUST00000079261 882 ntBASIC17.66■□□□□ 0.42
Tff3Q62395 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tff3Q62395 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tff3Q62395 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tff3Q62395 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tff3Q62395 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Tff3Q62395 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tff3Q62395 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tff3Q62395 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tff3Q62395 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.65■□□□□ 0.42
Tff3Q62395 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tff3Q62395 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Tff3Q62395 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Tff3Q62395 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.64■□□□□ 0.42
Tff3Q62395 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Tff3Q62395 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tff3Q62395 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Tff3Q62395 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Tff3Q62395 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tff3Q62395 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.64■□□□□ 0.41
Tff3Q62395 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Tff3Q62395 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Tff3Q62395 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.64■□□□□ 0.41
Tff3Q62395 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.64■□□□□ 0.41
Tff3Q62395 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tff3Q62395 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tff3Q62395 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms