Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox19Q62249 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox19Q62249 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox19Q62249 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox19Q62249 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox19Q62249 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox19Q62249 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox19Q62249 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox19Q62249 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.42■□□□□ 0.38
Sox19Q62249 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Sox19Q62249 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox19Q62249 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sox19Q62249 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.41■□□□□ 0.38
Sox19Q62249 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox19Q62249 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox19Q62249 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox19Q62249 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.41■□□□□ 0.38
Sox19Q62249 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox19Q62249 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox19Q62249 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.41■□□□□ 0.38
Sox19Q62249 Scarna2-201ENSMUST00000157560 414 ntBASIC17.41■□□□□ 0.38
Sox19Q62249 Gm16437-201ENSMUST00000025669 507 ntBASIC17.41■□□□□ 0.38
Sox19Q62249 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox19Q62249 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox19Q62249 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox19Q62249 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox19Q62249 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox19Q62249 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.4■□□□□ 0.38
Sox19Q62249 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Sox19Q62249 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox19Q62249 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox19Q62249 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox19Q62249 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sox19Q62249 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox19Q62249 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sox19Q62249 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox19Q62249 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.4■□□□□ 0.38
Sox19Q62249 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.39■□□□□ 0.38
Sox19Q62249 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Sox19Q62249 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Sox19Q62249 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox19Q62249 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox19Q62249 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Sox19Q62249 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.39■□□□□ 0.37
Sox19Q62249 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox19Q62249 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sox19Q62249 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Sox19Q62249 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sox19Q62249 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Sox19Q62249 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox19Q62249 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox19Q62249 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox19Q62249 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sox19Q62249 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.38■□□□□ 0.37
Sox19Q62249 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sox19Q62249 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox19Q62249 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Sox19Q62249 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sox19Q62249 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox19Q62249 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox19Q62249 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox19Q62249 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox19Q62249 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox19Q62249 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox19Q62249 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox19Q62249 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Sox19Q62249 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sox19Q62249 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sox19Q62249 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.37■□□□□ 0.37
Sox19Q62249 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox19Q62249 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox19Q62249 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox19Q62249 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox19Q62249 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.36■□□□□ 0.37
Sox19Q62249 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox19Q62249 Gm11687-201ENSMUST00000118911 886 ntBASIC17.36■□□□□ 0.37
Sox19Q62249 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox19Q62249 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Sox19Q62249 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox19Q62249 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox19Q62249 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox19Q62249 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox19Q62249 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox19Q62249 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Sox19Q62249 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox19Q62249 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Sox19Q62249 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.35■□□□□ 0.37
Sox19Q62249 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.35■□□□□ 0.37
Sox19Q62249 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox19Q62249 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Sox19Q62249 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox19Q62249 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox19Q62249 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Sox19Q62249 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sox19Q62249 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.34■□□□□ 0.37
Sox19Q62249 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sox19Q62249 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox19Q62249 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox19Q62249 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox19Q62249 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms