Protein–RNA interactions for Protein: Q62193

Rpa2, Replication protein A 32 kDa subunit, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa2Q62193 Gm22238-201ENSMUST00000175222 88 ntBASIC18.72■□□□□ 0.59
Rpa2Q62193 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Rpa2Q62193 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpa2Q62193 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Rpa2Q62193 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpa2Q62193 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rpa2Q62193 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rpa2Q62193 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Rpa2Q62193 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpa2Q62193 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rpa2Q62193 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpa2Q62193 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.71■□□□□ 0.59
Rpa2Q62193 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Rpa2Q62193 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpa2Q62193 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Rpa2Q62193 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpa2Q62193 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpa2Q62193 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpa2Q62193 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rpa2Q62193 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpa2Q62193 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rpa2Q62193 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Rpa2Q62193 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa2Q62193 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Rpa2Q62193 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.7■□□□□ 0.58
Rpa2Q62193 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa2Q62193 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa2Q62193 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa2Q62193 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa2Q62193 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa2Q62193 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa2Q62193 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa2Q62193 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa2Q62193 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Rpa2Q62193 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa2Q62193 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa2Q62193 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa2Q62193 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa2Q62193 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Rpa2Q62193 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.68■□□□□ 0.58
Rpa2Q62193 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa2Q62193 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa2Q62193 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa2Q62193 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
Rpa2Q62193 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa2Q62193 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa2Q62193 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa2Q62193 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa2Q62193 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.67■□□□□ 0.58
Rpa2Q62193 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpa2Q62193 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpa2Q62193 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Rpa2Q62193 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpa2Q62193 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rpa2Q62193 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpa2Q62193 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa2Q62193 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Rpa2Q62193 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa2Q62193 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa2Q62193 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa2Q62193 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.66■□□□□ 0.58
Rpa2Q62193 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa2Q62193 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa2Q62193 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.66■□□□□ 0.58
Rpa2Q62193 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa2Q62193 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa2Q62193 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpa2Q62193 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.65■□□□□ 0.58
Rpa2Q62193 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
Rpa2Q62193 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rpa2Q62193 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.65■□□□□ 0.58
Rpa2Q62193 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpa2Q62193 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpa2Q62193 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpa2Q62193 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rpa2Q62193 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpa2Q62193 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpa2Q62193 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.64■□□□□ 0.57
Rpa2Q62193 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpa2Q62193 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.64■□□□□ 0.57
Rpa2Q62193 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.64■□□□□ 0.57
Rpa2Q62193 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Rpa2Q62193 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Rpa2Q62193 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.63■□□□□ 0.57
Rpa2Q62193 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.63■□□□□ 0.57
Rpa2Q62193 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpa2Q62193 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Rpa2Q62193 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rpa2Q62193 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.63■□□□□ 0.57
Rpa2Q62193 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpa2Q62193 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpa2Q62193 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.63■□□□□ 0.57
Rpa2Q62193 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rpa2Q62193 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpa2Q62193 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa2Q62193 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa2Q62193 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa2Q62193 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa2Q62193 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa2Q62193 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 103.7 ms