Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vsx2Q61412 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vsx2Q61412 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vsx2Q61412 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Vsx2Q61412 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vsx2Q61412 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Vsx2Q61412 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vsx2Q61412 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vsx2Q61412 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Vsx2Q61412 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vsx2Q61412 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vsx2Q61412 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.81■□□□□ 0.76
Vsx2Q61412 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Vsx2Q61412 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.81■□□□□ 0.76
Vsx2Q61412 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.81■□□□□ 0.76
Vsx2Q61412 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.81■□□□□ 0.76
Vsx2Q61412 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vsx2Q61412 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vsx2Q61412 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Vsx2Q61412 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vsx2Q61412 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vsx2Q61412 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vsx2Q61412 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vsx2Q61412 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.8■□□□□ 0.76
Vsx2Q61412 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vsx2Q61412 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.8■□□□□ 0.76
Vsx2Q61412 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Vsx2Q61412 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Vsx2Q61412 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vsx2Q61412 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.79■□□□□ 0.76
Vsx2Q61412 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vsx2Q61412 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vsx2Q61412 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vsx2Q61412 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vsx2Q61412 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vsx2Q61412 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.78■□□□□ 0.76
Vsx2Q61412 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.78■□□□□ 0.76
Vsx2Q61412 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.78■□□□□ 0.76
Vsx2Q61412 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.78■□□□□ 0.76
Vsx2Q61412 Gm22238-201ENSMUST00000175222 88 ntBASIC19.78■□□□□ 0.76
Vsx2Q61412 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.78■□□□□ 0.76
Vsx2Q61412 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Vsx2Q61412 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vsx2Q61412 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vsx2Q61412 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vsx2Q61412 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vsx2Q61412 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Vsx2Q61412 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vsx2Q61412 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vsx2Q61412 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vsx2Q61412 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vsx2Q61412 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.77■□□□□ 0.76
Vsx2Q61412 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Vsx2Q61412 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vsx2Q61412 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.77■□□□□ 0.76
Vsx2Q61412 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
Vsx2Q61412 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.77■□□□□ 0.76
Vsx2Q61412 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vsx2Q61412 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vsx2Q61412 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vsx2Q61412 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vsx2Q61412 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vsx2Q61412 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vsx2Q61412 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.76■□□□□ 0.75
Vsx2Q61412 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vsx2Q61412 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
Vsx2Q61412 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vsx2Q61412 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vsx2Q61412 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.75■□□□□ 0.75
Vsx2Q61412 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vsx2Q61412 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vsx2Q61412 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vsx2Q61412 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Vsx2Q61412 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vsx2Q61412 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vsx2Q61412 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Vsx2Q61412 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vsx2Q61412 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vsx2Q61412 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vsx2Q61412 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vsx2Q61412 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vsx2Q61412 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vsx2Q61412 Notumos-201ENSMUST00000151998 2659 ntBASIC19.75■□□□□ 0.75
Vsx2Q61412 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vsx2Q61412 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vsx2Q61412 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vsx2Q61412 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vsx2Q61412 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vsx2Q61412 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vsx2Q61412 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vsx2Q61412 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Vsx2Q61412 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vsx2Q61412 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vsx2Q61412 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vsx2Q61412 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vsx2Q61412 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.73■□□□□ 0.75
Vsx2Q61412 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vsx2Q61412 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vsx2Q61412 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vsx2Q61412 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms