Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Gm15820-201ENSMUST00000201566 728 ntBASIC17.11■□□□□ 0.33
Foxf1Q61080 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.11■□□□□ 0.33
Foxf1Q61080 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxf1Q61080 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxf1Q61080 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxf1Q61080 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Foxf1Q61080 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxf1Q61080 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxf1Q61080 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Foxf1Q61080 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Foxf1Q61080 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.09■□□□□ 0.33
Foxf1Q61080 Gm40881-201ENSMUST00000223397 166 ntBASIC17.09■□□□□ 0.33
Foxf1Q61080 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxf1Q61080 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxf1Q61080 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.09■□□□□ 0.33
Foxf1Q61080 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.09■□□□□ 0.33
Foxf1Q61080 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Foxf1Q61080 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.08■□□□□ 0.33
Foxf1Q61080 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Foxf1Q61080 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Foxf1Q61080 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Foxf1Q61080 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.08■□□□□ 0.32
Foxf1Q61080 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.08■□□□□ 0.32
Foxf1Q61080 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Foxf1Q61080 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Foxf1Q61080 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Foxf1Q61080 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxf1Q61080 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxf1Q61080 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Foxf1Q61080 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Foxf1Q61080 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.07■□□□□ 0.32
Foxf1Q61080 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.07■□□□□ 0.32
Foxf1Q61080 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxf1Q61080 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Foxf1Q61080 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxf1Q61080 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxf1Q61080 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxf1Q61080 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Foxf1Q61080 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Foxf1Q61080 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxf1Q61080 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Foxf1Q61080 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.06■□□□□ 0.32
Foxf1Q61080 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxf1Q61080 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Foxf1Q61080 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxf1Q61080 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxf1Q61080 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxf1Q61080 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxf1Q61080 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxf1Q61080 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxf1Q61080 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Foxf1Q61080 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxf1Q61080 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxf1Q61080 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxf1Q61080 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.05■□□□□ 0.32
Foxf1Q61080 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxf1Q61080 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Foxf1Q61080 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxf1Q61080 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxf1Q61080 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxf1Q61080 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.05■□□□□ 0.32
Foxf1Q61080 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Foxf1Q61080 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Foxf1Q61080 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Foxf1Q61080 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxf1Q61080 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxf1Q61080 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxf1Q61080 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxf1Q61080 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Foxf1Q61080 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxf1Q61080 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Foxf1Q61080 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxf1Q61080 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxf1Q61080 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Foxf1Q61080 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxf1Q61080 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.03■□□□□ 0.32
Foxf1Q61080 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxf1Q61080 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxf1Q61080 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Foxf1Q61080 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxf1Q61080 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.03■□□□□ 0.32
Foxf1Q61080 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.03■□□□□ 0.32
Foxf1Q61080 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxf1Q61080 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxf1Q61080 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Foxf1Q61080 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Foxf1Q61080 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Foxf1Q61080 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Foxf1Q61080 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Foxf1Q61080 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxf1Q61080 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxf1Q61080 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxf1Q61080 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxf1Q61080 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.01■□□□□ 0.31
Foxf1Q61080 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxf1Q61080 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
Foxf1Q61080 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxf1Q61080 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxf1Q61080 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.01■□□□□ 0.31
Foxf1Q61080 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms