Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Xrcc1Q60596 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Xrcc1Q60596 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Xrcc1Q60596 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Xrcc1Q60596 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Xrcc1Q60596 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Xrcc1Q60596 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Xrcc1Q60596 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Xrcc1Q60596 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.53■□□□□ 0.72
Xrcc1Q60596 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Xrcc1Q60596 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.53■□□□□ 0.72
Xrcc1Q60596 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.53■□□□□ 0.72
Xrcc1Q60596 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Xrcc1Q60596 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Xrcc1Q60596 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.52■□□□□ 0.72
Xrcc1Q60596 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.52■□□□□ 0.72
Xrcc1Q60596 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Xrcc1Q60596 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Xrcc1Q60596 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Xrcc1Q60596 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Xrcc1Q60596 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Xrcc1Q60596 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Xrcc1Q60596 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Xrcc1Q60596 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Xrcc1Q60596 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Xrcc1Q60596 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Xrcc1Q60596 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Xrcc1Q60596 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.51■□□□□ 0.71
Xrcc1Q60596 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.51■□□□□ 0.71
Xrcc1Q60596 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Xrcc1Q60596 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Xrcc1Q60596 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Xrcc1Q60596 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Xrcc1Q60596 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Xrcc1Q60596 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Xrcc1Q60596 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Xrcc1Q60596 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.5■□□□□ 0.71
Xrcc1Q60596 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Xrcc1Q60596 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.5■□□□□ 0.71
Xrcc1Q60596 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.49■□□□□ 0.71
Xrcc1Q60596 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Xrcc1Q60596 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Xrcc1Q60596 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Xrcc1Q60596 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.49■□□□□ 0.71
Xrcc1Q60596 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.49■□□□□ 0.71
Xrcc1Q60596 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Xrcc1Q60596 Golgb1-201ENSMUST00000023534 498 ntBASIC19.49■□□□□ 0.71
Xrcc1Q60596 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Xrcc1Q60596 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Xrcc1Q60596 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Xrcc1Q60596 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Xrcc1Q60596 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Xrcc1Q60596 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Xrcc1Q60596 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Xrcc1Q60596 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Xrcc1Q60596 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Xrcc1Q60596 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Xrcc1Q60596 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.48■□□□□ 0.71
Xrcc1Q60596 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Xrcc1Q60596 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Xrcc1Q60596 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Xrcc1Q60596 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Xrcc1Q60596 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Xrcc1Q60596 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Xrcc1Q60596 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
Xrcc1Q60596 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Xrcc1Q60596 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Xrcc1Q60596 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Xrcc1Q60596 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Xrcc1Q60596 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Xrcc1Q60596 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Xrcc1Q60596 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.47■□□□□ 0.71
Xrcc1Q60596 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Xrcc1Q60596 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.47■□□□□ 0.71
Xrcc1Q60596 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Xrcc1Q60596 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Xrcc1Q60596 Gm13241-201ENSMUST00000094493 780 ntBASIC19.47■□□□□ 0.71
Xrcc1Q60596 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Xrcc1Q60596 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Xrcc1Q60596 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Xrcc1Q60596 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Xrcc1Q60596 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Xrcc1Q60596 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Xrcc1Q60596 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Xrcc1Q60596 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Xrcc1Q60596 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Xrcc1Q60596 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Xrcc1Q60596 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Xrcc1Q60596 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Xrcc1Q60596 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.46■□□□□ 0.71
Xrcc1Q60596 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.46■□□□□ 0.71
Xrcc1Q60596 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Xrcc1Q60596 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.46■□□□□ 0.71
Xrcc1Q60596 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Xrcc1Q60596 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Xrcc1Q60596 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Xrcc1Q60596 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Xrcc1Q60596 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Xrcc1Q60596 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Xrcc1Q60596 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms