Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps13aQ5H8C4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vps13aQ5H8C4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vps13aQ5H8C4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps13aQ5H8C4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps13aQ5H8C4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps13aQ5H8C4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.72■□□□□ 0.91
Vps13aQ5H8C4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Vps13aQ5H8C4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.71■□□□□ 0.91
Vps13aQ5H8C4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Vps13aQ5H8C4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.71■□□□□ 0.91
Vps13aQ5H8C4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vps13aQ5H8C4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Vps13aQ5H8C4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.71■□□□□ 0.91
Vps13aQ5H8C4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps13aQ5H8C4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vps13aQ5H8C4 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Vps13aQ5H8C4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vps13aQ5H8C4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps13aQ5H8C4 Gm22240-201ENSMUST00000175225 82 ntBASIC20.69■□□□□ 0.9
Vps13aQ5H8C4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps13aQ5H8C4 Smad6-203ENSMUST00000179458 273 ntBASIC20.69■□□□□ 0.9
Vps13aQ5H8C4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps13aQ5H8C4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Vps13aQ5H8C4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Vps13aQ5H8C4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vps13aQ5H8C4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.68■□□□□ 0.9
Vps13aQ5H8C4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps13aQ5H8C4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Vps13aQ5H8C4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Vps13aQ5H8C4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Vps13aQ5H8C4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vps13aQ5H8C4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps13aQ5H8C4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps13aQ5H8C4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps13aQ5H8C4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps13aQ5H8C4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vps13aQ5H8C4 Gm42778-201ENSMUST00000199644 553 ntBASIC20.67■□□□□ 0.9
Vps13aQ5H8C4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps13aQ5H8C4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Vps13aQ5H8C4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Vps13aQ5H8C4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps13aQ5H8C4 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vps13aQ5H8C4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.67■□□□□ 0.9
Vps13aQ5H8C4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vps13aQ5H8C4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps13aQ5H8C4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps13aQ5H8C4 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps13aQ5H8C4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps13aQ5H8C4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vps13aQ5H8C4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
Vps13aQ5H8C4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Vps13aQ5H8C4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Vps13aQ5H8C4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps13aQ5H8C4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vps13aQ5H8C4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vps13aQ5H8C4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vps13aQ5H8C4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Vps13aQ5H8C4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Vps13aQ5H8C4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps13aQ5H8C4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.64■□□□□ 0.89
Vps13aQ5H8C4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Vps13aQ5H8C4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.64■□□□□ 0.89
Vps13aQ5H8C4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Vps13aQ5H8C4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.64■□□□□ 0.89
Vps13aQ5H8C4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps13aQ5H8C4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps13aQ5H8C4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.63■□□□□ 0.89
Vps13aQ5H8C4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.63■□□□□ 0.89
Vps13aQ5H8C4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps13aQ5H8C4 Gm7143-201ENSMUST00000222811 859 ntBASIC20.63■□□□□ 0.89
Vps13aQ5H8C4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Vps13aQ5H8C4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Vps13aQ5H8C4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps13aQ5H8C4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps13aQ5H8C4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps13aQ5H8C4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Vps13aQ5H8C4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.62■□□□□ 0.89
Vps13aQ5H8C4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps13aQ5H8C4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps13aQ5H8C4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps13aQ5H8C4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.62■□□□□ 0.89
Vps13aQ5H8C4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps13aQ5H8C4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vps13aQ5H8C4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps13aQ5H8C4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps13aQ5H8C4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.61■□□□□ 0.89
Vps13aQ5H8C4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps13aQ5H8C4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps13aQ5H8C4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps13aQ5H8C4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps13aQ5H8C4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps13aQ5H8C4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Vps13aQ5H8C4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Vps13aQ5H8C4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.6■□□□□ 0.89
Vps13aQ5H8C4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps13aQ5H8C4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps13aQ5H8C4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.59■□□□□ 0.89
Vps13aQ5H8C4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.59■□□□□ 0.89
Vps13aQ5H8C4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms