Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
Pds5bQ4VA53 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC36.77■■■■□ 3.48
Pds5bQ4VA53 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
Pds5bQ4VA53 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC36.77■■■■□ 3.48
Pds5bQ4VA53 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
Pds5bQ4VA53 Gm8520-201ENSMUST00000186517 868 ntBASIC36.76■■■■□ 3.48
Pds5bQ4VA53 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC36.76■■■■□ 3.48
Pds5bQ4VA53 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.48
Pds5bQ4VA53 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.48
Pds5bQ4VA53 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC36.76■■■■□ 3.48
Pds5bQ4VA53 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.48
Pds5bQ4VA53 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.48
Pds5bQ4VA53 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC36.76■■■■□ 3.47
Pds5bQ4VA53 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.47
Pds5bQ4VA53 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC36.75■■■■□ 3.47
Pds5bQ4VA53 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
Pds5bQ4VA53 Gm14281-201ENSMUST00000121700 1294 ntBASIC36.75■■■■□ 3.47
Pds5bQ4VA53 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC36.74■■■■□ 3.47
Pds5bQ4VA53 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC36.74■■■■□ 3.47
Pds5bQ4VA53 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC36.74■■■■□ 3.47
Pds5bQ4VA53 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
Pds5bQ4VA53 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
Pds5bQ4VA53 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
Pds5bQ4VA53 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC36.73■■■■□ 3.47
Pds5bQ4VA53 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC36.72■■■■□ 3.47
Pds5bQ4VA53 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC36.72■■■■□ 3.47
Pds5bQ4VA53 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC36.72■■■■□ 3.47
Pds5bQ4VA53 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC36.72■■■■□ 3.47
Pds5bQ4VA53 Gm7977-201ENSMUST00000193787 748 ntBASIC36.72■■■■□ 3.47
Pds5bQ4VA53 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC36.72■■■■□ 3.47
Pds5bQ4VA53 AC158538.1-201ENSMUST00000225870 294 ntBASIC36.72■■■■□ 3.47
Pds5bQ4VA53 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC36.72■■■■□ 3.47
Pds5bQ4VA53 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC36.71■■■■□ 3.47
Pds5bQ4VA53 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC36.71■■■■□ 3.47
Pds5bQ4VA53 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC36.71■■■■□ 3.47
Pds5bQ4VA53 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC36.71■■■■□ 3.47
Pds5bQ4VA53 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC36.7■■■■□ 3.47
Pds5bQ4VA53 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
Pds5bQ4VA53 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
Pds5bQ4VA53 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC36.69■■■■□ 3.46
Pds5bQ4VA53 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC36.69■■■■□ 3.46
Pds5bQ4VA53 Mir5133-201ENSMUST00000174955 77 ntBASIC36.69■■■■□ 3.46
Pds5bQ4VA53 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC36.69■■■■□ 3.46
Pds5bQ4VA53 Ap3s1-204ENSMUST00000225520 957 ntBASIC36.69■■■■□ 3.46
Pds5bQ4VA53 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC36.69■■■■□ 3.46
Pds5bQ4VA53 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC36.68■■■■□ 3.46
Pds5bQ4VA53 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC36.68■■■■□ 3.46
Pds5bQ4VA53 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC36.68■■■■□ 3.46
Pds5bQ4VA53 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC36.68■■■■□ 3.46
Pds5bQ4VA53 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC36.68■■■■□ 3.46
Pds5bQ4VA53 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC36.68■■■■□ 3.46
Pds5bQ4VA53 Gm42555-201ENSMUST00000199304 1039 ntBASIC36.68■■■■□ 3.46
Pds5bQ4VA53 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC36.68■■■■□ 3.46
Pds5bQ4VA53 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC36.67■■■■□ 3.46
Pds5bQ4VA53 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC36.67■■■■□ 3.46
Pds5bQ4VA53 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC36.67■■■■□ 3.46
Pds5bQ4VA53 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC36.67■■■■□ 3.46
Pds5bQ4VA53 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC36.67■■■■□ 3.46
Pds5bQ4VA53 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC36.67■■■■□ 3.46
Pds5bQ4VA53 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC36.66■■■■□ 3.46
Pds5bQ4VA53 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
Pds5bQ4VA53 Gm9988-201ENSMUST00000069786 435 ntBASIC36.66■■■■□ 3.46
Pds5bQ4VA53 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC36.65■■■■□ 3.46
Pds5bQ4VA53 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
Pds5bQ4VA53 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
Pds5bQ4VA53 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
Pds5bQ4VA53 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC36.65■■■■□ 3.46
Pds5bQ4VA53 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC36.64■■■■□ 3.46
Pds5bQ4VA53 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC36.64■■■■□ 3.46
Pds5bQ4VA53 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC36.64■■■■□ 3.46
Pds5bQ4VA53 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC36.64■■■■□ 3.46
Pds5bQ4VA53 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC36.63■■■■□ 3.45
Pds5bQ4VA53 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC36.62■■■■□ 3.45
Pds5bQ4VA53 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC36.62■■■■□ 3.45
Pds5bQ4VA53 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC36.62■■■■□ 3.45
Pds5bQ4VA53 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
Pds5bQ4VA53 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC36.62■■■■□ 3.45
Pds5bQ4VA53 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
Pds5bQ4VA53 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC36.62■■■■□ 3.45
Pds5bQ4VA53 Gm27045-201ENSMUST00000182145 1402 ntBASIC36.62■■■■□ 3.45
Pds5bQ4VA53 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
Pds5bQ4VA53 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
Pds5bQ4VA53 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC36.61■■■■□ 3.45
Pds5bQ4VA53 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC36.6■■■■□ 3.45
Pds5bQ4VA53 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC36.6■■■■□ 3.45
Pds5bQ4VA53 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC36.6■■■■□ 3.45
Pds5bQ4VA53 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC36.6■■■■□ 3.45
Pds5bQ4VA53 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC36.6■■■■□ 3.45
Pds5bQ4VA53 Reep4-203ENSMUST00000226563 1444 ntBASIC36.6■■■■□ 3.45
Pds5bQ4VA53 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC36.6■■■■□ 3.45
Pds5bQ4VA53 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC36.6■■■■□ 3.45
Pds5bQ4VA53 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC36.6■■■■□ 3.45
Pds5bQ4VA53 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC36.6■■■■□ 3.45
Pds5bQ4VA53 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC36.6■■■■□ 3.45
Pds5bQ4VA53 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC36.59■■■■□ 3.45
Pds5bQ4VA53 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC36.59■■■■□ 3.45
Pds5bQ4VA53 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC36.58■■■■□ 3.45
Pds5bQ4VA53 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC36.58■■■■□ 3.45
Pds5bQ4VA53 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
Pds5bQ4VA53 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms