Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Zfp560Q3URI6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zfp560Q3URI6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zfp560Q3URI6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zfp560Q3URI6 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.49■□□□□ 0.87
Zfp560Q3URI6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zfp560Q3URI6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zfp560Q3URI6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zfp560Q3URI6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
Zfp560Q3URI6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zfp560Q3URI6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.49■□□□□ 0.87
Zfp560Q3URI6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zfp560Q3URI6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zfp560Q3URI6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
Zfp560Q3URI6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zfp560Q3URI6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Zfp560Q3URI6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Zfp560Q3URI6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zfp560Q3URI6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.47■□□□□ 0.87
Zfp560Q3URI6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.47■□□□□ 0.87
Zfp560Q3URI6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Zfp560Q3URI6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Zfp560Q3URI6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Zfp560Q3URI6 Gm7143-201ENSMUST00000222811 859 ntBASIC20.47■□□□□ 0.87
Zfp560Q3URI6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zfp560Q3URI6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zfp560Q3URI6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Zfp560Q3URI6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Zfp560Q3URI6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Zfp560Q3URI6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Zfp560Q3URI6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Zfp560Q3URI6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Zfp560Q3URI6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Zfp560Q3URI6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Zfp560Q3URI6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Zfp560Q3URI6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.46■□□□□ 0.87
Zfp560Q3URI6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Zfp560Q3URI6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Zfp560Q3URI6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Zfp560Q3URI6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Zfp560Q3URI6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Zfp560Q3URI6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.45■□□□□ 0.86
Zfp560Q3URI6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.45■□□□□ 0.86
Zfp560Q3URI6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Zfp560Q3URI6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Zfp560Q3URI6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Zfp560Q3URI6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Zfp560Q3URI6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Zfp560Q3URI6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Zfp560Q3URI6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.44■□□□□ 0.86
Zfp560Q3URI6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.44■□□□□ 0.86
Zfp560Q3URI6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.44■□□□□ 0.86
Zfp560Q3URI6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
Zfp560Q3URI6 Gm9870-201ENSMUST00000063874 645 ntBASIC20.44■□□□□ 0.86
Zfp560Q3URI6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Zfp560Q3URI6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.43■□□□□ 0.86
Zfp560Q3URI6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Zfp560Q3URI6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Zfp560Q3URI6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Zfp560Q3URI6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Zfp560Q3URI6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Zfp560Q3URI6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Zfp560Q3URI6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Zfp560Q3URI6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Zfp560Q3URI6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Zfp560Q3URI6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Zfp560Q3URI6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Zfp560Q3URI6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Zfp560Q3URI6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Zfp560Q3URI6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Zfp560Q3URI6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Zfp560Q3URI6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Zfp560Q3URI6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Zfp560Q3URI6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Zfp560Q3URI6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Zfp560Q3URI6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.4■□□□□ 0.86
Zfp560Q3URI6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Zfp560Q3URI6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Zfp560Q3URI6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Zfp560Q3URI6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Zfp560Q3URI6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.4■□□□□ 0.86
Zfp560Q3URI6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Zfp560Q3URI6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Zfp560Q3URI6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Zfp560Q3URI6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Zfp560Q3URI6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Zfp560Q3URI6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Zfp560Q3URI6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Zfp560Q3URI6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.39■□□□□ 0.85
Zfp560Q3URI6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Zfp560Q3URI6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Zfp560Q3URI6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Zfp560Q3URI6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Zfp560Q3URI6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.38■□□□□ 0.85
Zfp560Q3URI6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Zfp560Q3URI6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Zfp560Q3URI6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Zfp560Q3URI6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.38■□□□□ 0.85
Zfp560Q3URI6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Zfp560Q3URI6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms