Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnrc6aQ3UHK8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.18■□□□□ 0.66
Tnrc6aQ3UHK8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnrc6aQ3UHK8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnrc6aQ3UHK8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnrc6aQ3UHK8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.17■□□□□ 0.66
Tnrc6aQ3UHK8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnrc6aQ3UHK8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Tnrc6aQ3UHK8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Tnrc6aQ3UHK8 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.16■□□□□ 0.66
Tnrc6aQ3UHK8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnrc6aQ3UHK8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnrc6aQ3UHK8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnrc6aQ3UHK8 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.15■□□□□ 0.66
Tnrc6aQ3UHK8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.15■□□□□ 0.66
Tnrc6aQ3UHK8 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.15■□□□□ 0.66
Tnrc6aQ3UHK8 Gm8493-201ENSMUST00000196881 489 ntBASIC19.15■□□□□ 0.66
Tnrc6aQ3UHK8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnrc6aQ3UHK8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tnrc6aQ3UHK8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tnrc6aQ3UHK8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnrc6aQ3UHK8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnrc6aQ3UHK8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.14■□□□□ 0.65
Tnrc6aQ3UHK8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.13■□□□□ 0.65
Tnrc6aQ3UHK8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Tnrc6aQ3UHK8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Tnrc6aQ3UHK8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Tnrc6aQ3UHK8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnrc6aQ3UHK8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnrc6aQ3UHK8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tnrc6aQ3UHK8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.12■□□□□ 0.65
Tnrc6aQ3UHK8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
Tnrc6aQ3UHK8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnrc6aQ3UHK8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tnrc6aQ3UHK8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnrc6aQ3UHK8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnrc6aQ3UHK8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tnrc6aQ3UHK8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tnrc6aQ3UHK8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tnrc6aQ3UHK8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnrc6aQ3UHK8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tnrc6aQ3UHK8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnrc6aQ3UHK8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tnrc6aQ3UHK8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnrc6aQ3UHK8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnrc6aQ3UHK8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnrc6aQ3UHK8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.11■□□□□ 0.65
Tnrc6aQ3UHK8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnrc6aQ3UHK8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tnrc6aQ3UHK8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tnrc6aQ3UHK8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tnrc6aQ3UHK8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Tnrc6aQ3UHK8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tnrc6aQ3UHK8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Tnrc6aQ3UHK8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Tnrc6aQ3UHK8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tnrc6aQ3UHK8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Tnrc6aQ3UHK8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tnrc6aQ3UHK8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Tnrc6aQ3UHK8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.09■□□□□ 0.65
Tnrc6aQ3UHK8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnrc6aQ3UHK8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Tnrc6aQ3UHK8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.09■□□□□ 0.65
Tnrc6aQ3UHK8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Tnrc6aQ3UHK8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Tnrc6aQ3UHK8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnrc6aQ3UHK8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnrc6aQ3UHK8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnrc6aQ3UHK8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Tnrc6aQ3UHK8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Tnrc6aQ3UHK8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnrc6aQ3UHK8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnrc6aQ3UHK8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.09■□□□□ 0.65
Tnrc6aQ3UHK8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.08■□□□□ 0.65
Tnrc6aQ3UHK8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Tnrc6aQ3UHK8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Tnrc6aQ3UHK8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tnrc6aQ3UHK8 Gm29257-201ENSMUST00000186115 639 ntBASIC19.08■□□□□ 0.65
Tnrc6aQ3UHK8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Tnrc6aQ3UHK8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tnrc6aQ3UHK8 Gm10493-201ENSMUST00000097270 612 ntBASIC19.08■□□□□ 0.65
Tnrc6aQ3UHK8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tnrc6aQ3UHK8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Tnrc6aQ3UHK8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.07■□□□□ 0.64
Tnrc6aQ3UHK8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.07■□□□□ 0.64
Tnrc6aQ3UHK8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tnrc6aQ3UHK8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Tnrc6aQ3UHK8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnrc6aQ3UHK8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnrc6aQ3UHK8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tnrc6aQ3UHK8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.07■□□□□ 0.64
Tnrc6aQ3UHK8 Gm26833-201ENSMUST00000180899 440 ntBASIC19.07■□□□□ 0.64
Tnrc6aQ3UHK8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.07■□□□□ 0.64
Tnrc6aQ3UHK8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnrc6aQ3UHK8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tnrc6aQ3UHK8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Tnrc6aQ3UHK8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tnrc6aQ3UHK8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tnrc6aQ3UHK8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tnrc6aQ3UHK8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms