Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Khdc4Q3TCX3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Khdc4Q3TCX3 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.38■□□□□ 0.69
Khdc4Q3TCX3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Khdc4Q3TCX3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Khdc4Q3TCX3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
Khdc4Q3TCX3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.37■□□□□ 0.69
Khdc4Q3TCX3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
Khdc4Q3TCX3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Khdc4Q3TCX3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Khdc4Q3TCX3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Khdc4Q3TCX3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Khdc4Q3TCX3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Khdc4Q3TCX3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Khdc4Q3TCX3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Khdc4Q3TCX3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.36■□□□□ 0.69
Khdc4Q3TCX3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Khdc4Q3TCX3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Khdc4Q3TCX3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.36■□□□□ 0.69
Khdc4Q3TCX3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Khdc4Q3TCX3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Khdc4Q3TCX3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Khdc4Q3TCX3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Khdc4Q3TCX3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.35■□□□□ 0.69
Khdc4Q3TCX3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Khdc4Q3TCX3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Khdc4Q3TCX3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Khdc4Q3TCX3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Khdc4Q3TCX3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Khdc4Q3TCX3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Khdc4Q3TCX3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.34■□□□□ 0.69
Khdc4Q3TCX3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.34■□□□□ 0.69
Khdc4Q3TCX3 Serp2-204ENSMUST00000228055 705 ntBASIC19.34■□□□□ 0.69
Khdc4Q3TCX3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Khdc4Q3TCX3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Khdc4Q3TCX3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Khdc4Q3TCX3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Khdc4Q3TCX3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Khdc4Q3TCX3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Khdc4Q3TCX3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Khdc4Q3TCX3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Khdc4Q3TCX3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.33■□□□□ 0.68
Khdc4Q3TCX3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Khdc4Q3TCX3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Khdc4Q3TCX3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.32■□□□□ 0.68
Khdc4Q3TCX3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Khdc4Q3TCX3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Khdc4Q3TCX3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Khdc4Q3TCX3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Khdc4Q3TCX3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Khdc4Q3TCX3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Khdc4Q3TCX3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Khdc4Q3TCX3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Khdc4Q3TCX3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Khdc4Q3TCX3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Khdc4Q3TCX3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Khdc4Q3TCX3 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.31■□□□□ 0.68
Khdc4Q3TCX3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Khdc4Q3TCX3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Khdc4Q3TCX3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Khdc4Q3TCX3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Khdc4Q3TCX3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Khdc4Q3TCX3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Khdc4Q3TCX3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Khdc4Q3TCX3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Khdc4Q3TCX3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Khdc4Q3TCX3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Khdc4Q3TCX3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Khdc4Q3TCX3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Khdc4Q3TCX3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Khdc4Q3TCX3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Khdc4Q3TCX3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Khdc4Q3TCX3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Khdc4Q3TCX3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.29■□□□□ 0.68
Khdc4Q3TCX3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Khdc4Q3TCX3 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.29■□□□□ 0.68
Khdc4Q3TCX3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.29■□□□□ 0.68
Khdc4Q3TCX3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Khdc4Q3TCX3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Khdc4Q3TCX3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Khdc4Q3TCX3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Khdc4Q3TCX3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Khdc4Q3TCX3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Khdc4Q3TCX3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Khdc4Q3TCX3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Khdc4Q3TCX3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Khdc4Q3TCX3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Khdc4Q3TCX3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Khdc4Q3TCX3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Khdc4Q3TCX3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Khdc4Q3TCX3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Khdc4Q3TCX3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Khdc4Q3TCX3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Khdc4Q3TCX3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Khdc4Q3TCX3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Khdc4Q3TCX3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Khdc4Q3TCX3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Khdc4Q3TCX3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Khdc4Q3TCX3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Khdc4Q3TCX3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms