Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Treml4Q3LRV9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Treml4Q3LRV9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Treml4Q3LRV9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.18■□□□□ 0.66
Treml4Q3LRV9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Treml4Q3LRV9 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.18■□□□□ 0.66
Treml4Q3LRV9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.18■□□□□ 0.66
Treml4Q3LRV9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.18■□□□□ 0.66
Treml4Q3LRV9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Treml4Q3LRV9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Treml4Q3LRV9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Treml4Q3LRV9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.17■□□□□ 0.66
Treml4Q3LRV9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Treml4Q3LRV9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Treml4Q3LRV9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Treml4Q3LRV9 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.17■□□□□ 0.66
Treml4Q3LRV9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Treml4Q3LRV9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Treml4Q3LRV9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Treml4Q3LRV9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Treml4Q3LRV9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Treml4Q3LRV9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Treml4Q3LRV9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.16■□□□□ 0.66
Treml4Q3LRV9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Treml4Q3LRV9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.16■□□□□ 0.66
Treml4Q3LRV9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Treml4Q3LRV9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Treml4Q3LRV9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Treml4Q3LRV9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Treml4Q3LRV9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Treml4Q3LRV9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Treml4Q3LRV9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Treml4Q3LRV9 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.15■□□□□ 0.66
Treml4Q3LRV9 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.15■□□□□ 0.66
Treml4Q3LRV9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Treml4Q3LRV9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Treml4Q3LRV9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Treml4Q3LRV9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Treml4Q3LRV9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Treml4Q3LRV9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Treml4Q3LRV9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Treml4Q3LRV9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.14■□□□□ 0.65
Treml4Q3LRV9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Treml4Q3LRV9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Treml4Q3LRV9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Treml4Q3LRV9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Treml4Q3LRV9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Treml4Q3LRV9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.13■□□□□ 0.65
Treml4Q3LRV9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Treml4Q3LRV9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Treml4Q3LRV9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Treml4Q3LRV9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Treml4Q3LRV9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Treml4Q3LRV9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Treml4Q3LRV9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Treml4Q3LRV9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Treml4Q3LRV9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Treml4Q3LRV9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Treml4Q3LRV9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Treml4Q3LRV9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Treml4Q3LRV9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Treml4Q3LRV9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.11■□□□□ 0.65
Treml4Q3LRV9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Treml4Q3LRV9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Treml4Q3LRV9 Gm43173-201ENSMUST00000202246 593 ntBASIC19.1■□□□□ 0.65
Treml4Q3LRV9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.1■□□□□ 0.65
Treml4Q3LRV9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Treml4Q3LRV9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Treml4Q3LRV9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Treml4Q3LRV9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Treml4Q3LRV9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Treml4Q3LRV9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Treml4Q3LRV9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Treml4Q3LRV9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Treml4Q3LRV9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Treml4Q3LRV9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.09■□□□□ 0.65
Treml4Q3LRV9 Gm7143-201ENSMUST00000222811 859 ntBASIC19.09■□□□□ 0.65
Treml4Q3LRV9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.09■□□□□ 0.65
Treml4Q3LRV9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Treml4Q3LRV9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Treml4Q3LRV9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Treml4Q3LRV9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Treml4Q3LRV9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.08■□□□□ 0.65
Treml4Q3LRV9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Treml4Q3LRV9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.08■□□□□ 0.65
Treml4Q3LRV9 Gm29257-201ENSMUST00000186115 639 ntBASIC19.08■□□□□ 0.64
Treml4Q3LRV9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Treml4Q3LRV9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Treml4Q3LRV9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Treml4Q3LRV9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Treml4Q3LRV9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Treml4Q3LRV9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Treml4Q3LRV9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Treml4Q3LRV9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Treml4Q3LRV9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Treml4Q3LRV9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Treml4Q3LRV9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Treml4Q3LRV9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Treml4Q3LRV9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Treml4Q3LRV9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms