Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ush2AQ2QI47 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ush2AQ2QI47 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ush2AQ2QI47 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC11.36□□□□□ -0.59
Ush2AQ2QI47 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ush2AQ2QI47 Ap3s1-204ENSMUST00000225520 957 ntBASIC11.35□□□□□ -0.59
Ush2AQ2QI47 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ush2AQ2QI47 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ush2AQ2QI47 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ush2AQ2QI47 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ush2AQ2QI47 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Ush2AQ2QI47 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ush2AQ2QI47 Reep4-203ENSMUST00000226563 1444 ntBASIC11.35□□□□□ -0.59
Ush2AQ2QI47 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ush2AQ2QI47 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ush2AQ2QI47 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC11.35□□□□□ -0.59
Ush2AQ2QI47 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ush2AQ2QI47 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.34□□□□□ -0.59
Ush2AQ2QI47 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC11.34□□□□□ -0.59
Ush2AQ2QI47 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Ush2AQ2QI47 AC121577.1-201ENSMUST00000227302 707 ntBASIC11.34□□□□□ -0.59
Ush2AQ2QI47 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ush2AQ2QI47 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC11.34□□□□□ -0.59
Ush2AQ2QI47 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC11.34□□□□□ -0.59
Ush2AQ2QI47 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Ush2AQ2QI47 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Ush2AQ2QI47 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ush2AQ2QI47 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ush2AQ2QI47 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Ush2AQ2QI47 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC11.34□□□□□ -0.59
Ush2AQ2QI47 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC11.34□□□□□ -0.59
Ush2AQ2QI47 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Ush2AQ2QI47 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ush2AQ2QI47 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ush2AQ2QI47 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ush2AQ2QI47 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC11.33□□□□□ -0.6
Ush2AQ2QI47 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.33□□□□□ -0.6
Ush2AQ2QI47 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ush2AQ2QI47 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ush2AQ2QI47 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ush2AQ2QI47 Gm5408-201ENSMUST00000197998 747 ntBASIC11.33□□□□□ -0.6
Ush2AQ2QI47 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ush2AQ2QI47 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC11.32□□□□□ -0.6
Ush2AQ2QI47 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC11.32□□□□□ -0.6
Ush2AQ2QI47 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ush2AQ2QI47 AL672049.1-201ENSMUST00000197943 91 ntBASIC11.32□□□□□ -0.6
Ush2AQ2QI47 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ush2AQ2QI47 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ush2AQ2QI47 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ush2AQ2QI47 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ush2AQ2QI47 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ush2AQ2QI47 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ush2AQ2QI47 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ush2AQ2QI47 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ush2AQ2QI47 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ush2AQ2QI47 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ush2AQ2QI47 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ush2AQ2QI47 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC11.31□□□□□ -0.6
Ush2AQ2QI47 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ush2AQ2QI47 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC11.31□□□□□ -0.6
Ush2AQ2QI47 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ush2AQ2QI47 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ush2AQ2QI47 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ush2AQ2QI47 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ush2AQ2QI47 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC11.3□□□□□ -0.6
Ush2AQ2QI47 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Ush2AQ2QI47 Gm9484-201ENSMUST00000195892 1159 ntBASIC11.3□□□□□ -0.6
Ush2AQ2QI47 Trmt13-210ENSMUST00000198454 880 ntBASIC11.3□□□□□ -0.6
Ush2AQ2QI47 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ush2AQ2QI47 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ush2AQ2QI47 AC158990.1-201ENSMUST00000221450 2016 ntBASIC11.3□□□□□ -0.6
Ush2AQ2QI47 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ush2AQ2QI47 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.3□□□□□ -0.6
Ush2AQ2QI47 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ush2AQ2QI47 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ush2AQ2QI47 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.3□□□□□ -0.6
Ush2AQ2QI47 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ush2AQ2QI47 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ush2AQ2QI47 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC11.3□□□□□ -0.6
Ush2AQ2QI47 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ush2AQ2QI47 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ush2AQ2QI47 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ush2AQ2QI47 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC11.29□□□□□ -0.6
Ush2AQ2QI47 Kdm3b-204ENSMUST00000224715 2032 ntBASIC11.29□□□□□ -0.6
Ush2AQ2QI47 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ush2AQ2QI47 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ush2AQ2QI47 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ush2AQ2QI47 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC11.29□□□□□ -0.6
Ush2AQ2QI47 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ush2AQ2QI47 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ush2AQ2QI47 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ush2AQ2QI47 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ush2AQ2QI47 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ush2AQ2QI47 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ush2AQ2QI47 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ush2AQ2QI47 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ush2AQ2QI47 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ush2AQ2QI47 Gm9988-201ENSMUST00000069786 435 ntBASIC11.28□□□□□ -0.6
Ush2AQ2QI47 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ush2AQ2QI47 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms