Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptchd3Q0EEE2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.67■□□□□ 0.74
Ptchd3Q0EEE2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptchd3Q0EEE2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ptchd3Q0EEE2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Ptchd3Q0EEE2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.66■□□□□ 0.74
Ptchd3Q0EEE2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptchd3Q0EEE2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ptchd3Q0EEE2 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.66■□□□□ 0.74
Ptchd3Q0EEE2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptchd3Q0EEE2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ptchd3Q0EEE2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ptchd3Q0EEE2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.65■□□□□ 0.74
Ptchd3Q0EEE2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ptchd3Q0EEE2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ptchd3Q0EEE2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
Ptchd3Q0EEE2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ptchd3Q0EEE2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.64■□□□□ 0.73
Ptchd3Q0EEE2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ptchd3Q0EEE2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ptchd3Q0EEE2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.64■□□□□ 0.73
Ptchd3Q0EEE2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.64■□□□□ 0.73
Ptchd3Q0EEE2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
Ptchd3Q0EEE2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ptchd3Q0EEE2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ptchd3Q0EEE2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.64■□□□□ 0.73
Ptchd3Q0EEE2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Ptchd3Q0EEE2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ptchd3Q0EEE2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ptchd3Q0EEE2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ptchd3Q0EEE2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.63■□□□□ 0.73
Ptchd3Q0EEE2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ptchd3Q0EEE2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ptchd3Q0EEE2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ptchd3Q0EEE2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ptchd3Q0EEE2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ptchd3Q0EEE2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ptchd3Q0EEE2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ptchd3Q0EEE2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ptchd3Q0EEE2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ptchd3Q0EEE2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ptchd3Q0EEE2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.61■□□□□ 0.73
Ptchd3Q0EEE2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.61■□□□□ 0.73
Ptchd3Q0EEE2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ptchd3Q0EEE2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ptchd3Q0EEE2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ptchd3Q0EEE2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ptchd3Q0EEE2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ptchd3Q0EEE2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ptchd3Q0EEE2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ptchd3Q0EEE2 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.61■□□□□ 0.73
Ptchd3Q0EEE2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ptchd3Q0EEE2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ptchd3Q0EEE2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ptchd3Q0EEE2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ptchd3Q0EEE2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ptchd3Q0EEE2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ptchd3Q0EEE2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ptchd3Q0EEE2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ptchd3Q0EEE2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ptchd3Q0EEE2 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.59■□□□□ 0.73
Ptchd3Q0EEE2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ptchd3Q0EEE2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ptchd3Q0EEE2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ptchd3Q0EEE2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ptchd3Q0EEE2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ptchd3Q0EEE2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ptchd3Q0EEE2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ptchd3Q0EEE2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ptchd3Q0EEE2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ptchd3Q0EEE2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ptchd3Q0EEE2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ptchd3Q0EEE2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ptchd3Q0EEE2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ptchd3Q0EEE2 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.57■□□□□ 0.72
Ptchd3Q0EEE2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ptchd3Q0EEE2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Ptchd3Q0EEE2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.57■□□□□ 0.72
Ptchd3Q0EEE2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ptchd3Q0EEE2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ptchd3Q0EEE2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.57■□□□□ 0.72
Ptchd3Q0EEE2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.57■□□□□ 0.72
Ptchd3Q0EEE2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ptchd3Q0EEE2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ptchd3Q0EEE2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ptchd3Q0EEE2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ptchd3Q0EEE2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ptchd3Q0EEE2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ptchd3Q0EEE2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ptchd3Q0EEE2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ptchd3Q0EEE2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ptchd3Q0EEE2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ptchd3Q0EEE2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ptchd3Q0EEE2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ptchd3Q0EEE2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ptchd3Q0EEE2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ptchd3Q0EEE2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.56■□□□□ 0.72
Ptchd3Q0EEE2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ptchd3Q0EEE2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ptchd3Q0EEE2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms