Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ldb1P70662 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ldb1P70662 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ldb1P70662 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ldb1P70662 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ldb1P70662 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ldb1P70662 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ldb1P70662 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.35■□□□□ 0.85
Ldb1P70662 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ldb1P70662 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.35■□□□□ 0.85
Ldb1P70662 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ldb1P70662 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ldb1P70662 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ldb1P70662 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ldb1P70662 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ldb1P70662 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.34■□□□□ 0.85
Ldb1P70662 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ldb1P70662 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ldb1P70662 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.34■□□□□ 0.85
Ldb1P70662 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.34■□□□□ 0.85
Ldb1P70662 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.34■□□□□ 0.85
Ldb1P70662 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ldb1P70662 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ldb1P70662 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.33■□□□□ 0.85
Ldb1P70662 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.33■□□□□ 0.85
Ldb1P70662 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ldb1P70662 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ldb1P70662 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ldb1P70662 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ldb1P70662 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ldb1P70662 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ldb1P70662 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.32■□□□□ 0.84
Ldb1P70662 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ldb1P70662 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ldb1P70662 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ldb1P70662 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ldb1P70662 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ldb1P70662 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.31■□□□□ 0.84
Ldb1P70662 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Ldb1P70662 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ldb1P70662 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.31■□□□□ 0.84
Ldb1P70662 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.31■□□□□ 0.84
Ldb1P70662 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.31■□□□□ 0.84
Ldb1P70662 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ldb1P70662 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
Ldb1P70662 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ldb1P70662 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ldb1P70662 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ldb1P70662 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ldb1P70662 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ldb1P70662 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ldb1P70662 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ldb1P70662 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Ldb1P70662 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ldb1P70662 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ldb1P70662 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ldb1P70662 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ldb1P70662 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ldb1P70662 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ldb1P70662 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ldb1P70662 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ldb1P70662 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ldb1P70662 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ldb1P70662 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ldb1P70662 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ldb1P70662 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.29■□□□□ 0.84
Ldb1P70662 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ldb1P70662 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Ldb1P70662 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ldb1P70662 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ldb1P70662 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ldb1P70662 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ldb1P70662 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ldb1P70662 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ldb1P70662 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ldb1P70662 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ldb1P70662 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ldb1P70662 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ldb1P70662 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ldb1P70662 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ldb1P70662 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.27■□□□□ 0.84
Ldb1P70662 Gm9959-201ENSMUST00000068277 390 ntBASIC20.27■□□□□ 0.84
Ldb1P70662 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ldb1P70662 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ldb1P70662 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.27■□□□□ 0.83
Ldb1P70662 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Ldb1P70662 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ldb1P70662 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ldb1P70662 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ldb1P70662 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ldb1P70662 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ldb1P70662 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ldb1P70662 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.26■□□□□ 0.83
Ldb1P70662 Etf1-202ENSMUST00000180351 108 ntBASIC20.26■□□□□ 0.83
Ldb1P70662 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ldb1P70662 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Ldb1P70662 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ldb1P70662 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ldb1P70662 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ldb1P70662 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms