Protein–RNA interactions for Protein: P70338

Gfi1, Zinc finger protein Gfi-1, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1P70338 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gfi1P70338 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Gfi1P70338 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.47■□□□□ 0.71
Gfi1P70338 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gfi1P70338 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gfi1P70338 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gfi1P70338 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gfi1P70338 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.46■□□□□ 0.71
Gfi1P70338 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gfi1P70338 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.46■□□□□ 0.71
Gfi1P70338 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gfi1P70338 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gfi1P70338 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gfi1P70338 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gfi1P70338 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gfi1P70338 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gfi1P70338 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gfi1P70338 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gfi1P70338 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gfi1P70338 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.45■□□□□ 0.7
Gfi1P70338 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.45■□□□□ 0.7
Gfi1P70338 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Gfi1P70338 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gfi1P70338 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gfi1P70338 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gfi1P70338 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gfi1P70338 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gfi1P70338 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gfi1P70338 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gfi1P70338 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gfi1P70338 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gfi1P70338 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.44■□□□□ 0.7
Gfi1P70338 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.44■□□□□ 0.7
Gfi1P70338 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gfi1P70338 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gfi1P70338 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gfi1P70338 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gfi1P70338 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Gfi1P70338 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.43■□□□□ 0.7
Gfi1P70338 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gfi1P70338 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gfi1P70338 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gfi1P70338 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gfi1P70338 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gfi1P70338 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gfi1P70338 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gfi1P70338 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gfi1P70338 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gfi1P70338 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gfi1P70338 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gfi1P70338 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gfi1P70338 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gfi1P70338 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gfi1P70338 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gfi1P70338 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.42■□□□□ 0.7
Gfi1P70338 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.42■□□□□ 0.7
Gfi1P70338 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gfi1P70338 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gfi1P70338 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gfi1P70338 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Gfi1P70338 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gfi1P70338 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gfi1P70338 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gfi1P70338 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gfi1P70338 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gfi1P70338 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gfi1P70338 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gfi1P70338 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gfi1P70338 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gfi1P70338 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gfi1P70338 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gfi1P70338 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.41■□□□□ 0.7
Gfi1P70338 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Gfi1P70338 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Gfi1P70338 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gfi1P70338 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Gfi1P70338 Gm15546-201ENSMUST00000122095 826 ntBASIC19.4■□□□□ 0.7
Gfi1P70338 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gfi1P70338 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.4■□□□□ 0.7
Gfi1P70338 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.4■□□□□ 0.7
Gfi1P70338 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Gfi1P70338 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gfi1P70338 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.4■□□□□ 0.7
Gfi1P70338 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gfi1P70338 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Gfi1P70338 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Gfi1P70338 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gfi1P70338 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gfi1P70338 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gfi1P70338 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gfi1P70338 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Gfi1P70338 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Gfi1P70338 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gfi1P70338 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Gfi1P70338 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Gfi1P70338 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gfi1P70338 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gfi1P70338 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gfi1P70338 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gfi1P70338 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms