Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Lbx1P52955 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Lbx1P52955 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Lbx1P52955 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lbx1P52955 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Lbx1P52955 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.99■□□□□ 0.79
Lbx1P52955 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lbx1P52955 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Lbx1P52955 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lbx1P52955 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lbx1P52955 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lbx1P52955 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.98■□□□□ 0.79
Lbx1P52955 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lbx1P52955 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lbx1P52955 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lbx1P52955 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lbx1P52955 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lbx1P52955 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.97■□□□□ 0.79
Lbx1P52955 Gm7514-201ENSMUST00000209475 934 ntBASIC19.97■□□□□ 0.79
Lbx1P52955 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lbx1P52955 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lbx1P52955 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lbx1P52955 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lbx1P52955 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lbx1P52955 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.96■□□□□ 0.79
Lbx1P52955 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.96■□□□□ 0.79
Lbx1P52955 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lbx1P52955 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.95■□□□□ 0.78
Lbx1P52955 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.95■□□□□ 0.78
Lbx1P52955 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Lbx1P52955 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Lbx1P52955 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.95■□□□□ 0.78
Lbx1P52955 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.95■□□□□ 0.78
Lbx1P52955 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.95■□□□□ 0.78
Lbx1P52955 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lbx1P52955 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lbx1P52955 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lbx1P52955 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lbx1P52955 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.94■□□□□ 0.78
Lbx1P52955 Gm13234-201ENSMUST00000120010 747 ntBASIC19.94■□□□□ 0.78
Lbx1P52955 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Lbx1P52955 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.94■□□□□ 0.78
Lbx1P52955 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Lbx1P52955 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.93■□□□□ 0.78
Lbx1P52955 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Lbx1P52955 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lbx1P52955 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.93■□□□□ 0.78
Lbx1P52955 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.93■□□□□ 0.78
Lbx1P52955 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Lbx1P52955 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lbx1P52955 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Lbx1P52955 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.92■□□□□ 0.78
Lbx1P52955 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lbx1P52955 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.92■□□□□ 0.78
Lbx1P52955 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lbx1P52955 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lbx1P52955 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lbx1P52955 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lbx1P52955 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lbx1P52955 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lbx1P52955 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.91■□□□□ 0.78
Lbx1P52955 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Lbx1P52955 Gm5408-201ENSMUST00000197998 747 ntBASIC19.91■□□□□ 0.78
Lbx1P52955 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.91■□□□□ 0.78
Lbx1P52955 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lbx1P52955 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lbx1P52955 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lbx1P52955 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Lbx1P52955 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lbx1P52955 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lbx1P52955 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lbx1P52955 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lbx1P52955 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.9■□□□□ 0.78
Lbx1P52955 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.9■□□□□ 0.78
Lbx1P52955 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lbx1P52955 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lbx1P52955 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lbx1P52955 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Lbx1P52955 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lbx1P52955 Gm11421-201ENSMUST00000122124 294 ntBASIC19.89■□□□□ 0.77
Lbx1P52955 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.89■□□□□ 0.77
Lbx1P52955 Gm20049-201ENSMUST00000219950 730 ntBASIC19.89■□□□□ 0.77
Lbx1P52955 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.89■□□□□ 0.77
Lbx1P52955 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Lbx1P52955 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lbx1P52955 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lbx1P52955 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lbx1P52955 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lbx1P52955 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lbx1P52955 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Lbx1P52955 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lbx1P52955 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Lbx1P52955 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lbx1P52955 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Lbx1P52955 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.87■□□□□ 0.77
Lbx1P52955 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lbx1P52955 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lbx1P52955 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lbx1P52955 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.87■□□□□ 0.77
Lbx1P52955 Gm37856-201ENSMUST00000191634 999 ntBASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms