Protein–RNA interactions for Protein: P50571

Gabrb1, Gamma-aminobutyric acid receptor subunit beta-1, mousemouse

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabrb1P50571 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.16■□□□□ 0.5
Gabrb1P50571 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gabrb1P50571 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gabrb1P50571 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gabrb1P50571 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.16■□□□□ 0.5
Gabrb1P50571 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gabrb1P50571 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gabrb1P50571 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Gabrb1P50571 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gabrb1P50571 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gabrb1P50571 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gabrb1P50571 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gabrb1P50571 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gabrb1P50571 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gabrb1P50571 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.15■□□□□ 0.5
Gabrb1P50571 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.15■□□□□ 0.5
Gabrb1P50571 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gabrb1P50571 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gabrb1P50571 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.15■□□□□ 0.5
Gabrb1P50571 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gabrb1P50571 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gabrb1P50571 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Gabrb1P50571 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Gabrb1P50571 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Gabrb1P50571 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gabrb1P50571 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gabrb1P50571 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gabrb1P50571 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gabrb1P50571 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gabrb1P50571 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Gabrb1P50571 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gabrb1P50571 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gabrb1P50571 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gabrb1P50571 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.13■□□□□ 0.49
Gabrb1P50571 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gabrb1P50571 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Gabrb1P50571 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gabrb1P50571 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gabrb1P50571 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gabrb1P50571 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gabrb1P50571 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gabrb1P50571 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gabrb1P50571 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gabrb1P50571 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gabrb1P50571 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Gabrb1P50571 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gabrb1P50571 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gabrb1P50571 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gabrb1P50571 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gabrb1P50571 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.11■□□□□ 0.49
Gabrb1P50571 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gabrb1P50571 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gabrb1P50571 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gabrb1P50571 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gabrb1P50571 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gabrb1P50571 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Gabrb1P50571 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gabrb1P50571 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.1■□□□□ 0.49
Gabrb1P50571 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Gabrb1P50571 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gabrb1P50571 Gm11687-201ENSMUST00000118911 886 ntBASIC18.1■□□□□ 0.49
Gabrb1P50571 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gabrb1P50571 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gabrb1P50571 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Gabrb1P50571 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gabrb1P50571 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gabrb1P50571 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gabrb1P50571 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gabrb1P50571 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gabrb1P50571 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gabrb1P50571 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gabrb1P50571 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Gabrb1P50571 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gabrb1P50571 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gabrb1P50571 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.09■□□□□ 0.49
Gabrb1P50571 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Gabrb1P50571 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gabrb1P50571 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gabrb1P50571 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gabrb1P50571 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gabrb1P50571 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.08■□□□□ 0.48
Gabrb1P50571 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Gabrb1P50571 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.08■□□□□ 0.48
Gabrb1P50571 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gabrb1P50571 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.07■□□□□ 0.48
Gabrb1P50571 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gabrb1P50571 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gabrb1P50571 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gabrb1P50571 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gabrb1P50571 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gabrb1P50571 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gabrb1P50571 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gabrb1P50571 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gabrb1P50571 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gabrb1P50571 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Gabrb1P50571 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gabrb1P50571 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gabrb1P50571 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gabrb1P50571 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gabrb1P50571 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms