Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Srp9P49962 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.25■□□□□ 0.35
Srp9P49962 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Srp9P49962 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Srp9P49962 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Srp9P49962 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Srp9P49962 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Srp9P49962 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Srp9P49962 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Srp9P49962 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Srp9P49962 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Srp9P49962 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Srp9P49962 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Srp9P49962 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.24■□□□□ 0.35
Srp9P49962 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Srp9P49962 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Srp9P49962 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Srp9P49962 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Srp9P49962 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Srp9P49962 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Srp9P49962 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Srp9P49962 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.23■□□□□ 0.35
Srp9P49962 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Srp9P49962 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Srp9P49962 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Srp9P49962 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Srp9P49962 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Srp9P49962 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Srp9P49962 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.22■□□□□ 0.35
Srp9P49962 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Srp9P49962 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Srp9P49962 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Srp9P49962 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Srp9P49962 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Srp9P49962 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Srp9P49962 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.22■□□□□ 0.35
Srp9P49962 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Srp9P49962 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.22■□□□□ 0.35
Srp9P49962 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Srp9P49962 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Srp9P49962 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.22■□□□□ 0.35
Srp9P49962 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Srp9P49962 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Srp9P49962 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srp9P49962 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Srp9P49962 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srp9P49962 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.21■□□□□ 0.35
Srp9P49962 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srp9P49962 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Srp9P49962 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srp9P49962 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Srp9P49962 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srp9P49962 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srp9P49962 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srp9P49962 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srp9P49962 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Srp9P49962 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Srp9P49962 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srp9P49962 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srp9P49962 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.2■□□□□ 0.34
Srp9P49962 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Srp9P49962 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Srp9P49962 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Srp9P49962 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srp9P49962 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srp9P49962 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srp9P49962 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srp9P49962 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Srp9P49962 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Srp9P49962 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srp9P49962 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srp9P49962 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Srp9P49962 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Srp9P49962 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Srp9P49962 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Srp9P49962 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.19■□□□□ 0.34
Srp9P49962 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srp9P49962 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.19■□□□□ 0.34
Srp9P49962 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srp9P49962 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Srp9P49962 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
Srp9P49962 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Srp9P49962 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Srp9P49962 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Srp9P49962 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Srp9P49962 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Srp9P49962 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Srp9P49962 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.18■□□□□ 0.34
Srp9P49962 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Srp9P49962 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Srp9P49962 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Srp9P49962 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Srp9P49962 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Srp9P49962 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Srp9P49962 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Srp9P49962 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Srp9P49962 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Srp9P49962 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.17■□□□□ 0.34
Srp9P49962 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Srp9P49962 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms