Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rph3aP47708 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rph3aP47708 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
Rph3aP47708 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
Rph3aP47708 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rph3aP47708 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rph3aP47708 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rph3aP47708 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rph3aP47708 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.63■□□□□ 0.73
Rph3aP47708 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rph3aP47708 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rph3aP47708 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rph3aP47708 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rph3aP47708 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rph3aP47708 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rph3aP47708 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rph3aP47708 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rph3aP47708 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rph3aP47708 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rph3aP47708 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.61■□□□□ 0.73
Rph3aP47708 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rph3aP47708 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rph3aP47708 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
Rph3aP47708 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rph3aP47708 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rph3aP47708 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Rph3aP47708 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rph3aP47708 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Rph3aP47708 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rph3aP47708 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rph3aP47708 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rph3aP47708 Gm14117-201ENSMUST00000122417 843 ntBASIC19.6■□□□□ 0.73
Rph3aP47708 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Rph3aP47708 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.6■□□□□ 0.73
Rph3aP47708 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Rph3aP47708 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Rph3aP47708 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rph3aP47708 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rph3aP47708 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.6■□□□□ 0.73
Rph3aP47708 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rph3aP47708 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.59■□□□□ 0.73
Rph3aP47708 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rph3aP47708 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rph3aP47708 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Rph3aP47708 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rph3aP47708 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rph3aP47708 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rph3aP47708 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rph3aP47708 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rph3aP47708 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rph3aP47708 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rph3aP47708 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rph3aP47708 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.58■□□□□ 0.72
Rph3aP47708 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rph3aP47708 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rph3aP47708 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.58■□□□□ 0.72
Rph3aP47708 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Rph3aP47708 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rph3aP47708 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rph3aP47708 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rph3aP47708 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rph3aP47708 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.57■□□□□ 0.72
Rph3aP47708 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rph3aP47708 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Rph3aP47708 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rph3aP47708 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rph3aP47708 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rph3aP47708 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rph3aP47708 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rph3aP47708 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rph3aP47708 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rph3aP47708 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rph3aP47708 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rph3aP47708 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rph3aP47708 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rph3aP47708 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
Rph3aP47708 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Rph3aP47708 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rph3aP47708 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Rph3aP47708 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rph3aP47708 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rph3aP47708 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rph3aP47708 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Rph3aP47708 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rph3aP47708 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rph3aP47708 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rph3aP47708 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rph3aP47708 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rph3aP47708 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rph3aP47708 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rph3aP47708 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rph3aP47708 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Rph3aP47708 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rph3aP47708 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rph3aP47708 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.52■□□□□ 0.72
Rph3aP47708 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rph3aP47708 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.52■□□□□ 0.72
Rph3aP47708 Gm22238-201ENSMUST00000175222 88 ntBASIC19.52■□□□□ 0.72
Rph3aP47708 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.52■□□□□ 0.72
Rph3aP47708 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms