Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Abca1P41233 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Abca1P41233 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Abca1P41233 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.89■□□□□ 0.29
Abca1P41233 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Abca1P41233 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Abca1P41233 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Abca1P41233 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.88■□□□□ 0.29
Abca1P41233 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.88■□□□□ 0.29
Abca1P41233 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Abca1P41233 Gm12251-201ENSMUST00000117893 792 ntBASIC16.88■□□□□ 0.29
Abca1P41233 Gm9870-201ENSMUST00000063874 645 ntBASIC16.88■□□□□ 0.29
Abca1P41233 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Abca1P41233 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Abca1P41233 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.87■□□□□ 0.29
Abca1P41233 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abca1P41233 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abca1P41233 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abca1P41233 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Abca1P41233 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Abca1P41233 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Abca1P41233 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Abca1P41233 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Abca1P41233 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Abca1P41233 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Abca1P41233 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Abca1P41233 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Abca1P41233 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.86■□□□□ 0.29
Abca1P41233 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.86■□□□□ 0.29
Abca1P41233 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.86■□□□□ 0.29
Abca1P41233 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.86■□□□□ 0.29
Abca1P41233 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Abca1P41233 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.85■□□□□ 0.29
Abca1P41233 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Abca1P41233 Gm27405-201ENSMUST00000184201 112 ntBASIC16.85■□□□□ 0.29
Abca1P41233 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Abca1P41233 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abca1P41233 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abca1P41233 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Abca1P41233 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abca1P41233 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Abca1P41233 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abca1P41233 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.84■□□□□ 0.29
Abca1P41233 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abca1P41233 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Abca1P41233 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.83■□□□□ 0.29
Abca1P41233 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Abca1P41233 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Abca1P41233 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Abca1P41233 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.83■□□□□ 0.28
Abca1P41233 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Abca1P41233 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Abca1P41233 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.83■□□□□ 0.28
Abca1P41233 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Abca1P41233 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Abca1P41233 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Abca1P41233 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abca1P41233 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abca1P41233 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Abca1P41233 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Abca1P41233 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abca1P41233 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abca1P41233 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abca1P41233 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.82■□□□□ 0.28
Abca1P41233 Gm10493-201ENSMUST00000097270 612 ntBASIC16.82■□□□□ 0.28
Abca1P41233 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Abca1P41233 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Abca1P41233 Gm7291-201ENSMUST00000199147 382 ntBASIC16.81■□□□□ 0.28
Abca1P41233 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Abca1P41233 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Abca1P41233 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Abca1P41233 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.81■□□□□ 0.28
Abca1P41233 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.81■□□□□ 0.28
Abca1P41233 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.81■□□□□ 0.28
Abca1P41233 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Abca1P41233 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Abca1P41233 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Abca1P41233 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Abca1P41233 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abca1P41233 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abca1P41233 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.8■□□□□ 0.28
Abca1P41233 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abca1P41233 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Abca1P41233 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abca1P41233 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Abca1P41233 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abca1P41233 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.8■□□□□ 0.28
Abca1P41233 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abca1P41233 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abca1P41233 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abca1P41233 Gm10849-201ENSMUST00000100397 618 ntBASIC16.8■□□□□ 0.28
Abca1P41233 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Abca1P41233 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abca1P41233 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abca1P41233 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abca1P41233 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.8■□□□□ 0.28
Abca1P41233 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
Abca1P41233 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Abca1P41233 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Abca1P41233 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms