Protein–RNA interactions for Protein: P35980

Rpl18, 60S ribosomal protein L18, mousemouse

Known RBP Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl18P35980 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpl18P35980 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Rpl18P35980 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpl18P35980 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpl18P35980 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.4■□□□□ 0.54
Rpl18P35980 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpl18P35980 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpl18P35980 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Rpl18P35980 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpl18P35980 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpl18P35980 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rpl18P35980 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Rpl18P35980 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpl18P35980 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rpl18P35980 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.39■□□□□ 0.53
Rpl18P35980 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.39■□□□□ 0.53
Rpl18P35980 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rpl18P35980 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpl18P35980 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpl18P35980 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rpl18P35980 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rpl18P35980 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.38■□□□□ 0.53
Rpl18P35980 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.38■□□□□ 0.53
Rpl18P35980 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpl18P35980 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpl18P35980 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpl18P35980 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpl18P35980 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpl18P35980 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpl18P35980 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rpl18P35980 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpl18P35980 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.37■□□□□ 0.53
Rpl18P35980 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rpl18P35980 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpl18P35980 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Rpl18P35980 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpl18P35980 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.37■□□□□ 0.53
Rpl18P35980 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpl18P35980 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rpl18P35980 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpl18P35980 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpl18P35980 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpl18P35980 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpl18P35980 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpl18P35980 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rpl18P35980 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpl18P35980 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Rpl18P35980 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rpl18P35980 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpl18P35980 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.35■□□□□ 0.53
Rpl18P35980 Gm10399-202ENSMUST00000202768 748 ntBASIC18.35■□□□□ 0.53
Rpl18P35980 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rpl18P35980 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rpl18P35980 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.35■□□□□ 0.53
Rpl18P35980 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl18P35980 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.34■□□□□ 0.53
Rpl18P35980 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl18P35980 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rpl18P35980 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl18P35980 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpl18P35980 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpl18P35980 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpl18P35980 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpl18P35980 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Rpl18P35980 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Rpl18P35980 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpl18P35980 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl18P35980 Gm10232-201ENSMUST00000089221 720 ntBASIC18.33■□□□□ 0.52
Rpl18P35980 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl18P35980 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rpl18P35980 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl18P35980 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl18P35980 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl18P35980 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl18P35980 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl18P35980 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl18P35980 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl18P35980 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl18P35980 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl18P35980 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl18P35980 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl18P35980 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl18P35980 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rpl18P35980 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl18P35980 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.31■□□□□ 0.52
Rpl18P35980 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl18P35980 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl18P35980 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl18P35980 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl18P35980 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.31■□□□□ 0.52
Rpl18P35980 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl18P35980 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Rpl18P35980 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl18P35980 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rpl18P35980 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl18P35980 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl18P35980 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl18P35980 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl18P35980 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl18P35980 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms