Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.34■□□□□ 0.85
Nckap1P28660 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Nckap1P28660 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nckap1P28660 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Nckap1P28660 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nckap1P28660 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nckap1P28660 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nckap1P28660 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nckap1P28660 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.33■□□□□ 0.85
Nckap1P28660 Gm8493-201ENSMUST00000196881 489 ntBASIC20.33■□□□□ 0.85
Nckap1P28660 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nckap1P28660 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.33■□□□□ 0.84
Nckap1P28660 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nckap1P28660 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nckap1P28660 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nckap1P28660 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nckap1P28660 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nckap1P28660 Gm43530-201ENSMUST00000195920 274 ntBASIC20.32■□□□□ 0.84
Nckap1P28660 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.32■□□□□ 0.84
Nckap1P28660 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nckap1P28660 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.32■□□□□ 0.84
Nckap1P28660 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
Nckap1P28660 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
Nckap1P28660 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nckap1P28660 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Nckap1P28660 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nckap1P28660 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nckap1P28660 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nckap1P28660 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nckap1P28660 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nckap1P28660 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nckap1P28660 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nckap1P28660 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nckap1P28660 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Nckap1P28660 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nckap1P28660 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.3■□□□□ 0.84
Nckap1P28660 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nckap1P28660 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.3■□□□□ 0.84
Nckap1P28660 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Nckap1P28660 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Nckap1P28660 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nckap1P28660 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nckap1P28660 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nckap1P28660 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.3■□□□□ 0.84
Nckap1P28660 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nckap1P28660 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Nckap1P28660 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.29■□□□□ 0.84
Nckap1P28660 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.29■□□□□ 0.84
Nckap1P28660 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.28■□□□□ 0.84
Nckap1P28660 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nckap1P28660 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nckap1P28660 Gm43017-201ENSMUST00000198296 752 ntBASIC20.28■□□□□ 0.84
Nckap1P28660 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nckap1P28660 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nckap1P28660 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Nckap1P28660 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nckap1P28660 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Nckap1P28660 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nckap1P28660 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.28■□□□□ 0.84
Nckap1P28660 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nckap1P28660 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nckap1P28660 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nckap1P28660 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nckap1P28660 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Nckap1P28660 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.27■□□□□ 0.84
Nckap1P28660 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.27■□□□□ 0.84
Nckap1P28660 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nckap1P28660 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nckap1P28660 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nckap1P28660 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.26■□□□□ 0.83
Nckap1P28660 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nckap1P28660 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nckap1P28660 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nckap1P28660 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Nckap1P28660 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nckap1P28660 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nckap1P28660 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nckap1P28660 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Nckap1P28660 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nckap1P28660 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nckap1P28660 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nckap1P28660 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nckap1P28660 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nckap1P28660 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.25■□□□□ 0.83
Nckap1P28660 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nckap1P28660 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Nckap1P28660 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.25■□□□□ 0.83
Nckap1P28660 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.25■□□□□ 0.83
Nckap1P28660 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Nckap1P28660 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Nckap1P28660 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nckap1P28660 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nckap1P28660 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nckap1P28660 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Nckap1P28660 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nckap1P28660 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nckap1P28660 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nckap1P28660 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Nckap1P28660 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nckap1P28660 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms