Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.44■□□□□ 0.54
Cbx3P23198 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cbx3P23198 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.43■□□□□ 0.54
Cbx3P23198 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cbx3P23198 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cbx3P23198 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Cbx3P23198 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cbx3P23198 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cbx3P23198 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cbx3P23198 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cbx3P23198 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cbx3P23198 Gm4799-201ENSMUST00000095396 657 ntBASIC18.43■□□□□ 0.54
Cbx3P23198 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cbx3P23198 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cbx3P23198 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cbx3P23198 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cbx3P23198 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cbx3P23198 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cbx3P23198 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cbx3P23198 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cbx3P23198 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cbx3P23198 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cbx3P23198 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cbx3P23198 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cbx3P23198 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.42■□□□□ 0.54
Cbx3P23198 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Cbx3P23198 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cbx3P23198 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cbx3P23198 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cbx3P23198 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cbx3P23198 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cbx3P23198 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cbx3P23198 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cbx3P23198 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cbx3P23198 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cbx3P23198 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cbx3P23198 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cbx3P23198 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cbx3P23198 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cbx3P23198 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cbx3P23198 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cbx3P23198 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cbx3P23198 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Cbx3P23198 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cbx3P23198 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cbx3P23198 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cbx3P23198 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.39■□□□□ 0.53
Cbx3P23198 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cbx3P23198 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cbx3P23198 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cbx3P23198 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cbx3P23198 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Cbx3P23198 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cbx3P23198 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cbx3P23198 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cbx3P23198 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cbx3P23198 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cbx3P23198 Gm7432-201ENSMUST00000210343 879 ntBASIC18.38■□□□□ 0.53
Cbx3P23198 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.38■□□□□ 0.53
Cbx3P23198 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cbx3P23198 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cbx3P23198 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cbx3P23198 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cbx3P23198 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.37■□□□□ 0.53
Cbx3P23198 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cbx3P23198 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cbx3P23198 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cbx3P23198 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cbx3P23198 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.36■□□□□ 0.53
Cbx3P23198 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cbx3P23198 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cbx3P23198 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cbx3P23198 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cbx3P23198 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cbx3P23198 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.36■□□□□ 0.53
Cbx3P23198 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cbx3P23198 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cbx3P23198 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cbx3P23198 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.36■□□□□ 0.53
Cbx3P23198 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Cbx3P23198 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cbx3P23198 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cbx3P23198 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cbx3P23198 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cbx3P23198 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cbx3P23198 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cbx3P23198 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cbx3P23198 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cbx3P23198 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cbx3P23198 Golph3-205ENSMUST00000228671 2842 ntBASIC18.35■□□□□ 0.53
Cbx3P23198 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.35■□□□□ 0.53
Cbx3P23198 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cbx3P23198 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.35■□□□□ 0.53
Cbx3P23198 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cbx3P23198 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cbx3P23198 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.35■□□□□ 0.53
Cbx3P23198 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cbx3P23198 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Cbx3P23198 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cbx3P23198 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms