Protein–RNA interactions for Protein: P15314

Irf1, Interferon regulatory factor 1, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf1P15314 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Irf1P15314 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.71■□□□□ 0.59
Irf1P15314 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Irf1P15314 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Irf1P15314 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Irf1P15314 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Irf1P15314 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Irf1P15314 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.7■□□□□ 0.58
Irf1P15314 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf1P15314 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf1P15314 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Irf1P15314 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf1P15314 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf1P15314 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.7■□□□□ 0.58
Irf1P15314 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf1P15314 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Irf1P15314 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.7■□□□□ 0.58
Irf1P15314 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf1P15314 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf1P15314 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Irf1P15314 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.69■□□□□ 0.58
Irf1P15314 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf1P15314 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Irf1P15314 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Irf1P15314 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf1P15314 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf1P15314 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.68■□□□□ 0.58
Irf1P15314 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf1P15314 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Irf1P15314 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf1P15314 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Irf1P15314 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf1P15314 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf1P15314 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.67■□□□□ 0.58
Irf1P15314 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.67■□□□□ 0.58
Irf1P15314 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Irf1P15314 Gm13241-201ENSMUST00000094493 780 ntBASIC18.67■□□□□ 0.58
Irf1P15314 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf1P15314 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf1P15314 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Irf1P15314 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Irf1P15314 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf1P15314 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf1P15314 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Irf1P15314 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf1P15314 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Irf1P15314 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf1P15314 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Irf1P15314 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.66■□□□□ 0.58
Irf1P15314 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Irf1P15314 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.66■□□□□ 0.58
Irf1P15314 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Irf1P15314 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf1P15314 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf1P15314 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Irf1P15314 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Irf1P15314 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.65■□□□□ 0.58
Irf1P15314 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf1P15314 Gm15039-201ENSMUST00000118914 875 ntBASIC18.65■□□□□ 0.58
Irf1P15314 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf1P15314 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Irf1P15314 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf1P15314 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Irf1P15314 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Irf1P15314 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf1P15314 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
Irf1P15314 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.64■□□□□ 0.57
Irf1P15314 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf1P15314 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Irf1P15314 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
Irf1P15314 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.63■□□□□ 0.57
Irf1P15314 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.63■□□□□ 0.57
Irf1P15314 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.63■□□□□ 0.57
Irf1P15314 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf1P15314 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf1P15314 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf1P15314 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf1P15314 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.63■□□□□ 0.57
Irf1P15314 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Irf1P15314 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf1P15314 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.62■□□□□ 0.57
Irf1P15314 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Irf1P15314 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.62■□□□□ 0.57
Irf1P15314 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf1P15314 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Irf1P15314 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf1P15314 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf1P15314 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Irf1P15314 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Irf1P15314 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf1P15314 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Irf1P15314 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Irf1P15314 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf1P15314 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf1P15314 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Irf1P15314 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.61■□□□□ 0.57
Irf1P15314 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
Irf1P15314 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf1P15314 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.61■□□□□ 0.57
Irf1P15314 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms