Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Srp54P14576 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.06■□□□□ 0.8
Srp54P14576 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Srp54P14576 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Srp54P14576 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Srp54P14576 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Srp54P14576 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Srp54P14576 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Srp54P14576 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Srp54P14576 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.05■□□□□ 0.8
Srp54P14576 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Srp54P14576 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Srp54P14576 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.05■□□□□ 0.8
Srp54P14576 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Srp54P14576 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Srp54P14576 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
Srp54P14576 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Srp54P14576 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Srp54P14576 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.04■□□□□ 0.8
Srp54P14576 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Srp54P14576 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Srp54P14576 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Srp54P14576 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Srp54P14576 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Srp54P14576 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Srp54P14576 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Srp54P14576 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.03■□□□□ 0.8
Srp54P14576 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Srp54P14576 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Srp54P14576 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Srp54P14576 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Srp54P14576 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Srp54P14576 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Srp54P14576 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Srp54P14576 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Srp54P14576 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Srp54P14576 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Srp54P14576 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Srp54P14576 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Srp54P14576 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Srp54P14576 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20■□□□□ 0.79
Srp54P14576 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Srp54P14576 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Srp54P14576 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Srp54P14576 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Srp54P14576 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Srp54P14576 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20■□□□□ 0.79
Srp54P14576 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20■□□□□ 0.79
Srp54P14576 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Srp54P14576 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Srp54P14576 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Srp54P14576 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Srp54P14576 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Srp54P14576 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
Srp54P14576 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Srp54P14576 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.99■□□□□ 0.79
Srp54P14576 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Srp54P14576 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Srp54P14576 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Srp54P14576 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Srp54P14576 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.99■□□□□ 0.79
Srp54P14576 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Srp54P14576 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
Srp54P14576 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.98■□□□□ 0.79
Srp54P14576 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Srp54P14576 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Srp54P14576 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Srp54P14576 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Srp54P14576 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.98■□□□□ 0.79
Srp54P14576 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.98■□□□□ 0.79
Srp54P14576 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Srp54P14576 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Srp54P14576 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Srp54P14576 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Srp54P14576 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Srp54P14576 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Srp54P14576 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.97■□□□□ 0.79
Srp54P14576 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.97■□□□□ 0.79
Srp54P14576 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Srp54P14576 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.97■□□□□ 0.79
Srp54P14576 Gm43137-201ENSMUST00000198052 594 ntBASIC19.97■□□□□ 0.79
Srp54P14576 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Srp54P14576 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.97■□□□□ 0.79
Srp54P14576 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Srp54P14576 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Srp54P14576 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Srp54P14576 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Srp54P14576 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Srp54P14576 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.96■□□□□ 0.79
Srp54P14576 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Srp54P14576 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Srp54P14576 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Srp54P14576 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.96■□□□□ 0.79
Srp54P14576 Serp2-204ENSMUST00000228055 705 ntBASIC19.96■□□□□ 0.79
Srp54P14576 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.96■□□□□ 0.79
Srp54P14576 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.96■□□□□ 0.79
Srp54P14576 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Srp54P14576 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Srp54P14576 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Srp54P14576 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms