Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ctla2aP12399 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctla2aP12399 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctla2aP12399 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctla2aP12399 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctla2aP12399 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Ctla2aP12399 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.37■□□□□ 0.53
Ctla2aP12399 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctla2aP12399 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ctla2aP12399 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctla2aP12399 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctla2aP12399 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctla2aP12399 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctla2aP12399 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctla2aP12399 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ctla2aP12399 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ctla2aP12399 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ctla2aP12399 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.36■□□□□ 0.53
Ctla2aP12399 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ctla2aP12399 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ctla2aP12399 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ctla2aP12399 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ctla2aP12399 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ctla2aP12399 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ctla2aP12399 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ctla2aP12399 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Ctla2aP12399 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ctla2aP12399 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ctla2aP12399 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.35■□□□□ 0.53
Ctla2aP12399 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ctla2aP12399 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ctla2aP12399 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ctla2aP12399 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ctla2aP12399 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctla2aP12399 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctla2aP12399 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctla2aP12399 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctla2aP12399 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctla2aP12399 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctla2aP12399 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ctla2aP12399 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctla2aP12399 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.34■□□□□ 0.53
Ctla2aP12399 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ctla2aP12399 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ctla2aP12399 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ctla2aP12399 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Ctla2aP12399 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.33■□□□□ 0.52
Ctla2aP12399 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ctla2aP12399 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Ctla2aP12399 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Ctla2aP12399 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ctla2aP12399 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ctla2aP12399 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ctla2aP12399 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.32■□□□□ 0.52
Ctla2aP12399 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.32■□□□□ 0.52
Ctla2aP12399 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ctla2aP12399 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Ctla2aP12399 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.32■□□□□ 0.52
Ctla2aP12399 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ctla2aP12399 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ctla2aP12399 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ctla2aP12399 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.32■□□□□ 0.52
Ctla2aP12399 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ctla2aP12399 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ctla2aP12399 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ctla2aP12399 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ctla2aP12399 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ctla2aP12399 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ctla2aP12399 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.31■□□□□ 0.52
Ctla2aP12399 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.31■□□□□ 0.52
Ctla2aP12399 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ctla2aP12399 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ctla2aP12399 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ctla2aP12399 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.3■□□□□ 0.52
Ctla2aP12399 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ctla2aP12399 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ctla2aP12399 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ctla2aP12399 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ctla2aP12399 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ctla2aP12399 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.29■□□□□ 0.52
Ctla2aP12399 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ctla2aP12399 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ctla2aP12399 Gm7432-201ENSMUST00000210343 879 ntBASIC18.29■□□□□ 0.52
Ctla2aP12399 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.29■□□□□ 0.52
Ctla2aP12399 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ctla2aP12399 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ctla2aP12399 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ctla2aP12399 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ctla2aP12399 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ctla2aP12399 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Ctla2aP12399 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ctla2aP12399 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ctla2aP12399 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ctla2aP12399 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ctla2aP12399 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ctla2aP12399 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Ctla2aP12399 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ctla2aP12399 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ctla2aP12399 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ctla2aP12399 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms