Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Fn1P11276 Reep4-203ENSMUST00000226563 1444 ntBASIC16.06■□□□□ 0.16
Fn1P11276 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Fn1P11276 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.06■□□□□ 0.16
Fn1P11276 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Fn1P11276 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Fn1P11276 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Fn1P11276 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Fn1P11276 Gm13234-201ENSMUST00000120010 747 ntBASIC16.05■□□□□ 0.16
Fn1P11276 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.05■□□□□ 0.16
Fn1P11276 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.05■□□□□ 0.16
Fn1P11276 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Fn1P11276 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.05■□□□□ 0.16
Fn1P11276 Gm20049-201ENSMUST00000219950 730 ntBASIC16.05■□□□□ 0.16
Fn1P11276 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Fn1P11276 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Fn1P11276 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Fn1P11276 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Fn1P11276 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Fn1P11276 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Fn1P11276 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Fn1P11276 Gm37856-201ENSMUST00000191634 999 ntBASIC16.04■□□□□ 0.16
Fn1P11276 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.04■□□□□ 0.16
Fn1P11276 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Fn1P11276 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.04■□□□□ 0.16
Fn1P11276 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.04■□□□□ 0.16
Fn1P11276 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.04■□□□□ 0.16
Fn1P11276 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Fn1P11276 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.04■□□□□ 0.16
Fn1P11276 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Fn1P11276 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Fn1P11276 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.04■□□□□ 0.16
Fn1P11276 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Fn1P11276 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.04■□□□□ 0.16
Fn1P11276 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Fn1P11276 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Fn1P11276 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.03■□□□□ 0.16
Fn1P11276 Gm10812-201ENSMUST00000099864 546 ntBASIC16.03■□□□□ 0.16
Fn1P11276 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Fn1P11276 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC16.03■□□□□ 0.16
Fn1P11276 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Fn1P11276 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Fn1P11276 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Fn1P11276 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Fn1P11276 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.03■□□□□ 0.16
Fn1P11276 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Fn1P11276 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.02■□□□□ 0.16
Fn1P11276 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Fn1P11276 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Fn1P11276 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Fn1P11276 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.02■□□□□ 0.16
Fn1P11276 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Fn1P11276 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Fn1P11276 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Fn1P11276 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Fn1P11276 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.02■□□□□ 0.15
Fn1P11276 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Fn1P11276 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Fn1P11276 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Fn1P11276 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Fn1P11276 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Fn1P11276 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Fn1P11276 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Fn1P11276 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Fn1P11276 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.01■□□□□ 0.15
Fn1P11276 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Fn1P11276 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Fn1P11276 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16■□□□□ 0.15
Fn1P11276 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Fn1P11276 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Fn1P11276 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Fn1P11276 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Fn1P11276 Gm14281-201ENSMUST00000121700 1294 ntBASIC16■□□□□ 0.15
Fn1P11276 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16■□□□□ 0.15
Fn1P11276 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Fn1P11276 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Fn1P11276 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Fn1P11276 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Fn1P11276 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.99■□□□□ 0.15
Fn1P11276 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Fn1P11276 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Fn1P11276 Gm7514-201ENSMUST00000209475 934 ntBASIC15.99■□□□□ 0.15
Fn1P11276 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Fn1P11276 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Fn1P11276 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Fn1P11276 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Fn1P11276 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Fn1P11276 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Fn1P11276 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Fn1P11276 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Fn1P11276 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Fn1P11276 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Fn1P11276 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Fn1P11276 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Fn1P11276 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Fn1P11276 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Fn1P11276 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Fn1P11276 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Fn1P11276 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Fn1P11276 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms