Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nid1P10493 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nid1P10493 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nid1P10493 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Nid1P10493 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nid1P10493 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Nid1P10493 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nid1P10493 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Nid1P10493 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.22■□□□□ 0.67
Nid1P10493 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nid1P10493 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nid1P10493 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nid1P10493 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Nid1P10493 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.21■□□□□ 0.67
Nid1P10493 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Nid1P10493 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.21■□□□□ 0.67
Nid1P10493 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nid1P10493 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nid1P10493 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nid1P10493 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nid1P10493 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.21■□□□□ 0.67
Nid1P10493 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nid1P10493 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nid1P10493 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.2■□□□□ 0.66
Nid1P10493 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nid1P10493 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.2■□□□□ 0.66
Nid1P10493 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nid1P10493 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
Nid1P10493 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nid1P10493 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.2■□□□□ 0.66
Nid1P10493 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nid1P10493 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nid1P10493 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nid1P10493 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Nid1P10493 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nid1P10493 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nid1P10493 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nid1P10493 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nid1P10493 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nid1P10493 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nid1P10493 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.18■□□□□ 0.66
Nid1P10493 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nid1P10493 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nid1P10493 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nid1P10493 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.18■□□□□ 0.66
Nid1P10493 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.18■□□□□ 0.66
Nid1P10493 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Nid1P10493 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nid1P10493 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nid1P10493 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nid1P10493 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.18■□□□□ 0.66
Nid1P10493 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nid1P10493 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.17■□□□□ 0.66
Nid1P10493 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nid1P10493 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Nid1P10493 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nid1P10493 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nid1P10493 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Nid1P10493 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nid1P10493 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.17■□□□□ 0.66
Nid1P10493 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nid1P10493 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nid1P10493 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.17■□□□□ 0.66
Nid1P10493 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nid1P10493 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nid1P10493 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nid1P10493 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Nid1P10493 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nid1P10493 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nid1P10493 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.16■□□□□ 0.66
Nid1P10493 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Nid1P10493 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nid1P10493 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nid1P10493 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nid1P10493 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nid1P10493 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.16■□□□□ 0.66
Nid1P10493 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Nid1P10493 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nid1P10493 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nid1P10493 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nid1P10493 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.15■□□□□ 0.66
Nid1P10493 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nid1P10493 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nid1P10493 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nid1P10493 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nid1P10493 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nid1P10493 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nid1P10493 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nid1P10493 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.14■□□□□ 0.65
Nid1P10493 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Nid1P10493 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nid1P10493 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.14■□□□□ 0.65
Nid1P10493 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nid1P10493 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nid1P10493 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nid1P10493 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nid1P10493 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nid1P10493 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.13■□□□□ 0.65
Nid1P10493 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nid1P10493 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms