Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxa9P09631 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxa9P09631 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
Hoxa9P09631 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxa9P09631 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxa9P09631 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxa9P09631 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxa9P09631 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxa9P09631 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxa9P09631 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxa9P09631 Gm8493-201ENSMUST00000196881 489 ntBASIC20.62■□□□□ 0.89
Hoxa9P09631 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.62■□□□□ 0.89
Hoxa9P09631 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Hoxa9P09631 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Hoxa9P09631 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxa9P09631 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.61■□□□□ 0.89
Hoxa9P09631 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxa9P09631 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Hoxa9P09631 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxa9P09631 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxa9P09631 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Hoxa9P09631 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.61■□□□□ 0.89
Hoxa9P09631 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxa9P09631 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.61■□□□□ 0.89
Hoxa9P09631 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxa9P09631 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxa9P09631 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxa9P09631 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.6■□□□□ 0.89
Hoxa9P09631 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxa9P09631 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Hoxa9P09631 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxa9P09631 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxa9P09631 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxa9P09631 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Hoxa9P09631 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxa9P09631 Gm43017-201ENSMUST00000198296 752 ntBASIC20.59■□□□□ 0.89
Hoxa9P09631 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Hoxa9P09631 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hoxa9P09631 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hoxa9P09631 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Hoxa9P09631 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.58■□□□□ 0.88
Hoxa9P09631 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Hoxa9P09631 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxa9P09631 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxa9P09631 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.57■□□□□ 0.88
Hoxa9P09631 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxa9P09631 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxa9P09631 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxa9P09631 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Hoxa9P09631 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxa9P09631 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Hoxa9P09631 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxa9P09631 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.56■□□□□ 0.88
Hoxa9P09631 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxa9P09631 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxa9P09631 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxa9P09631 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.56■□□□□ 0.88
Hoxa9P09631 Gm43530-201ENSMUST00000195920 274 ntBASIC20.56■□□□□ 0.88
Hoxa9P09631 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
Hoxa9P09631 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.56■□□□□ 0.88
Hoxa9P09631 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxa9P09631 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxa9P09631 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Hoxa9P09631 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Hoxa9P09631 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Hoxa9P09631 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxa9P09631 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxa9P09631 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Hoxa9P09631 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxa9P09631 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Hoxa9P09631 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.53■□□□□ 0.88
Hoxa9P09631 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxa9P09631 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxa9P09631 Gm43173-201ENSMUST00000202246 593 ntBASIC20.53■□□□□ 0.88
Hoxa9P09631 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxa9P09631 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Hoxa9P09631 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxa9P09631 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Hoxa9P09631 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxa9P09631 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.52■□□□□ 0.88
Hoxa9P09631 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxa9P09631 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxa9P09631 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxa9P09631 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Hoxa9P09631 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxa9P09631 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxa9P09631 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.51■□□□□ 0.87
Hoxa9P09631 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxa9P09631 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxa9P09631 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxa9P09631 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxa9P09631 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Hoxa9P09631 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxa9P09631 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxa9P09631 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Hoxa9P09631 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Hoxa9P09631 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.5■□□□□ 0.87
Hoxa9P09631 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxa9P09631 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxa9P09631 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms