Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
P06328 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
P06328 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.95□□□□□ -0.02
P06328 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
P06328 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
P06328 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
P06328 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
P06328 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
P06328 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
P06328 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
P06328 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
P06328 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
P06328 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
P06328 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
P06328 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
P06328 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
P06328 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
P06328 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
P06328 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
P06328 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.94□□□□□ -0.02
P06328 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
P06328 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
P06328 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.94□□□□□ -0.02
P06328 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
P06328 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
P06328 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
P06328 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
P06328 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
P06328 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
P06328 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
P06328 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
P06328 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
P06328 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
P06328 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
P06328 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
P06328 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.94□□□□□ -0.02
P06328 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
P06328 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
P06328 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
P06328 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
P06328 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
P06328 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
P06328 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
P06328 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
P06328 Nsd1-203ENSMUST00000224156 1149 ntBASIC14.93□□□□□ -0.02
P06328 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
P06328 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
P06328 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
P06328 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
P06328 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
P06328 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
P06328 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
P06328 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
P06328 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
P06328 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
P06328 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
P06328 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
P06328 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
P06328 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
P06328 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
P06328 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.92□□□□□ -0.02
P06328 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
P06328 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
P06328 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
P06328 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
P06328 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
P06328 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
P06328 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
P06328 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
P06328 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
P06328 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
P06328 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
P06328 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
P06328 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
P06328 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
P06328 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
P06328 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
P06328 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
P06328 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.9□□□□□ -0.02
P06328 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC14.9□□□□□ -0.02
P06328 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
P06328 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
P06328 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
P06328 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
P06328 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC14.9□□□□□ -0.02
P06328 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
P06328 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
P06328 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
P06328 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
P06328 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
P06328 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
P06328 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.89□□□□□ -0.03
P06328 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
P06328 Gm45444-201ENSMUST00000211394 898 ntBASIC14.89□□□□□ -0.03
P06328 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
P06328 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.89□□□□□ -0.03
P06328 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
P06328 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
P06328 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
P06328 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms