Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TcraP01849 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
TcraP01849 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TcraP01849 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TcraP01849 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TcraP01849 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TcraP01849 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
TcraP01849 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TcraP01849 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TcraP01849 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TcraP01849 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TcraP01849 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TcraP01849 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TcraP01849 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TcraP01849 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
TcraP01849 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
TcraP01849 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC14.82□□□□□ -0.04
TcraP01849 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TcraP01849 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TcraP01849 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TcraP01849 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TcraP01849 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC14.81□□□□□ -0.04
TcraP01849 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TcraP01849 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TcraP01849 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TcraP01849 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TcraP01849 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TcraP01849 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TcraP01849 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TcraP01849 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TcraP01849 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TcraP01849 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TcraP01849 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TcraP01849 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TcraP01849 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TcraP01849 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TcraP01849 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TcraP01849 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC14.8□□□□□ -0.04
TcraP01849 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TcraP01849 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TcraP01849 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TcraP01849 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TcraP01849 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TcraP01849 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TcraP01849 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TcraP01849 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.79□□□□□ -0.04
TcraP01849 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.79□□□□□ -0.04
TcraP01849 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TcraP01849 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TcraP01849 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TcraP01849 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TcraP01849 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TcraP01849 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TcraP01849 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TcraP01849 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TcraP01849 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
TcraP01849 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TcraP01849 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TcraP01849 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TcraP01849 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TcraP01849 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TcraP01849 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TcraP01849 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TcraP01849 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TcraP01849 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TcraP01849 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TcraP01849 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TcraP01849 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TcraP01849 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TcraP01849 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TcraP01849 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TcraP01849 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
TcraP01849 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC14.77□□□□□ -0.05
TcraP01849 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC14.77□□□□□ -0.05
TcraP01849 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TcraP01849 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.77□□□□□ -0.05
TcraP01849 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC14.77□□□□□ -0.05
TcraP01849 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TcraP01849 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TcraP01849 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TcraP01849 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TcraP01849 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TcraP01849 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TcraP01849 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TcraP01849 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TcraP01849 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TcraP01849 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TcraP01849 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC14.76□□□□□ -0.05
TcraP01849 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TcraP01849 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TcraP01849 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TcraP01849 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TcraP01849 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TcraP01849 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TcraP01849 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TcraP01849 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TcraP01849 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TcraP01849 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TcraP01849 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TcraP01849 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms