Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hcn1O88704 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hcn1O88704 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hcn1O88704 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Hcn1O88704 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hcn1O88704 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Hcn1O88704 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hcn1O88704 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hcn1O88704 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hcn1O88704 Etf1-202ENSMUST00000180351 108 ntBASIC19.45■□□□□ 0.7
Hcn1O88704 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.45■□□□□ 0.7
Hcn1O88704 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hcn1O88704 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.45■□□□□ 0.7
Hcn1O88704 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hcn1O88704 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hcn1O88704 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hcn1O88704 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hcn1O88704 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.44■□□□□ 0.7
Hcn1O88704 Gm10399-202ENSMUST00000202768 748 ntBASIC19.44■□□□□ 0.7
Hcn1O88704 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.44■□□□□ 0.7
Hcn1O88704 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hcn1O88704 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hcn1O88704 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Hcn1O88704 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Hcn1O88704 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hcn1O88704 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hcn1O88704 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hcn1O88704 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.43■□□□□ 0.7
Hcn1O88704 Gm40881-201ENSMUST00000223397 166 ntBASIC19.43■□□□□ 0.7
Hcn1O88704 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hcn1O88704 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hcn1O88704 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Hcn1O88704 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hcn1O88704 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hcn1O88704 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hcn1O88704 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.42■□□□□ 0.7
Hcn1O88704 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hcn1O88704 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hcn1O88704 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hcn1O88704 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.42■□□□□ 0.7
Hcn1O88704 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.42■□□□□ 0.7
Hcn1O88704 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hcn1O88704 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hcn1O88704 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hcn1O88704 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hcn1O88704 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Hcn1O88704 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hcn1O88704 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Hcn1O88704 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hcn1O88704 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hcn1O88704 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Hcn1O88704 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.41■□□□□ 0.7
Hcn1O88704 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Hcn1O88704 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.41■□□□□ 0.7
Hcn1O88704 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.41■□□□□ 0.7
Hcn1O88704 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hcn1O88704 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hcn1O88704 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hcn1O88704 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Hcn1O88704 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Hcn1O88704 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hcn1O88704 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hcn1O88704 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hcn1O88704 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hcn1O88704 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.39■□□□□ 0.69
Hcn1O88704 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hcn1O88704 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hcn1O88704 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hcn1O88704 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Hcn1O88704 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hcn1O88704 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hcn1O88704 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hcn1O88704 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.38■□□□□ 0.69
Hcn1O88704 Gm7417-201ENSMUST00000192950 473 ntBASIC19.38■□□□□ 0.69
Hcn1O88704 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.38■□□□□ 0.69
Hcn1O88704 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hcn1O88704 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hcn1O88704 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hcn1O88704 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hcn1O88704 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hcn1O88704 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hcn1O88704 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hcn1O88704 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Hcn1O88704 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hcn1O88704 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hcn1O88704 Golph3-202ENSMUST00000226517 2359 ntBASIC19.37■□□□□ 0.69
Hcn1O88704 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hcn1O88704 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hcn1O88704 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hcn1O88704 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hcn1O88704 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Hcn1O88704 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hcn1O88704 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Hcn1O88704 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hcn1O88704 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.36■□□□□ 0.69
Hcn1O88704 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.36■□□□□ 0.69
Hcn1O88704 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hcn1O88704 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Hcn1O88704 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hcn1O88704 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms