Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn1O88551 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn1O88551 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn1O88551 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cldn1O88551 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cldn1O88551 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn1O88551 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.45■□□□□ 0.38
Cldn1O88551 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cldn1O88551 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn1O88551 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn1O88551 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn1O88551 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
Cldn1O88551 Gm12251-201ENSMUST00000117893 792 ntBASIC17.44■□□□□ 0.38
Cldn1O88551 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn1O88551 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.44■□□□□ 0.38
Cldn1O88551 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn1O88551 Gm27011-201ENSMUST00000182352 972 ntBASIC17.44■□□□□ 0.38
Cldn1O88551 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cldn1O88551 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn1O88551 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn1O88551 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn1O88551 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn1O88551 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.44■□□□□ 0.38
Cldn1O88551 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.43■□□□□ 0.38
Cldn1O88551 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.43■□□□□ 0.38
Cldn1O88551 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn1O88551 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn1O88551 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.43■□□□□ 0.38
Cldn1O88551 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn1O88551 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn1O88551 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cldn1O88551 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.43■□□□□ 0.38
Cldn1O88551 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Cldn1O88551 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn1O88551 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Cldn1O88551 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn1O88551 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Cldn1O88551 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn1O88551 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn1O88551 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cldn1O88551 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn1O88551 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Cldn1O88551 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn1O88551 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
Cldn1O88551 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cldn1O88551 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Cldn1O88551 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Cldn1O88551 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn1O88551 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn1O88551 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn1O88551 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn1O88551 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn1O88551 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn1O88551 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.41■□□□□ 0.38
Cldn1O88551 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn1O88551 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.41■□□□□ 0.38
Cldn1O88551 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.41■□□□□ 0.38
Cldn1O88551 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.41■□□□□ 0.38
Cldn1O88551 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn1O88551 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cldn1O88551 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cldn1O88551 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn1O88551 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn1O88551 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn1O88551 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn1O88551 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn1O88551 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn1O88551 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn1O88551 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cldn1O88551 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn1O88551 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn1O88551 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn1O88551 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn1O88551 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn1O88551 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cldn1O88551 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn1O88551 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.39■□□□□ 0.38
Cldn1O88551 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn1O88551 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cldn1O88551 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn1O88551 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn1O88551 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cldn1O88551 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.39■□□□□ 0.37
Cldn1O88551 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.39■□□□□ 0.37
Cldn1O88551 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn1O88551 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn1O88551 Gm10493-201ENSMUST00000097270 612 ntBASIC17.39■□□□□ 0.37
Cldn1O88551 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn1O88551 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.38■□□□□ 0.37
Cldn1O88551 Gm37179-201ENSMUST00000194862 823 ntBASIC17.38■□□□□ 0.37
Cldn1O88551 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.38■□□□□ 0.37
Cldn1O88551 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.38■□□□□ 0.37
Cldn1O88551 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn1O88551 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn1O88551 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn1O88551 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn1O88551 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn1O88551 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn1O88551 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn1O88551 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms