Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ldb2O55203 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ldb2O55203 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ldb2O55203 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ldb2O55203 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ldb2O55203 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ldb2O55203 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ldb2O55203 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
Ldb2O55203 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ldb2O55203 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ldb2O55203 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ldb2O55203 Gm14117-201ENSMUST00000122417 843 ntBASIC20.36■□□□□ 0.85
Ldb2O55203 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ldb2O55203 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ldb2O55203 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ldb2O55203 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
Ldb2O55203 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ldb2O55203 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ldb2O55203 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ldb2O55203 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ldb2O55203 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ldb2O55203 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.35■□□□□ 0.85
Ldb2O55203 Rps24-207ENSMUST00000224568 714 ntBASIC20.35■□□□□ 0.85
Ldb2O55203 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ldb2O55203 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ldb2O55203 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ldb2O55203 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ldb2O55203 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ldb2O55203 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ldb2O55203 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ldb2O55203 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ldb2O55203 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Ldb2O55203 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ldb2O55203 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ldb2O55203 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ldb2O55203 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ldb2O55203 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.33■□□□□ 0.85
Ldb2O55203 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ldb2O55203 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ldb2O55203 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.33■□□□□ 0.85
Ldb2O55203 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Ldb2O55203 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ldb2O55203 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ldb2O55203 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ldb2O55203 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ldb2O55203 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ldb2O55203 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ldb2O55203 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ldb2O55203 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ldb2O55203 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ldb2O55203 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.32■□□□□ 0.84
Ldb2O55203 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.32■□□□□ 0.84
Ldb2O55203 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ldb2O55203 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ldb2O55203 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ldb2O55203 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ldb2O55203 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ldb2O55203 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Ldb2O55203 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ldb2O55203 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ldb2O55203 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ldb2O55203 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.31■□□□□ 0.84
Ldb2O55203 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.31■□□□□ 0.84
Ldb2O55203 Gm22238-201ENSMUST00000175222 88 ntBASIC20.31■□□□□ 0.84
Ldb2O55203 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.31■□□□□ 0.84
Ldb2O55203 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ldb2O55203 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ldb2O55203 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ldb2O55203 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Ldb2O55203 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ldb2O55203 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ldb2O55203 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
Ldb2O55203 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ldb2O55203 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ldb2O55203 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ldb2O55203 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ldb2O55203 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ldb2O55203 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ldb2O55203 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ldb2O55203 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ldb2O55203 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.29■□□□□ 0.84
Ldb2O55203 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.29■□□□□ 0.84
Ldb2O55203 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Ldb2O55203 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ldb2O55203 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ldb2O55203 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ldb2O55203 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.29■□□□□ 0.84
Ldb2O55203 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.29■□□□□ 0.84
Ldb2O55203 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ldb2O55203 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ldb2O55203 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ldb2O55203 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ldb2O55203 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.28■□□□□ 0.84
Ldb2O55203 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.28■□□□□ 0.84
Ldb2O55203 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Ldb2O55203 Gm9870-201ENSMUST00000063874 645 ntBASIC20.28■□□□□ 0.84
Ldb2O55203 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ldb2O55203 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ldb2O55203 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ldb2O55203 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms